occCite: Querying and Managing Large Biodiversity Occurrence Datasets

Facilitates the gathering of biodiversity occurrence data from disparate sources. Metadata is managed throughout the process to facilitate reporting and enhanced ability to repeat analyses.

Version: 0.6.1
Depends: R (≥ 3.5.0)
Imports: BIEN, DBI, RefManageR, RColorBrewer, RPostgreSQL, bib2df, curl, dplyr, ggplot2, htmltools, leaflet, lubridate, methods, rgbif (≥ 3.1), rlang, stats, stringr, tidyr, viridis
Suggests: ape, bit64, covr, httr, knitr, remotes, rmarkdown, taxize (≥ 0.10), testthat, waffle
Published: 2025-09-29
DOI: 10.32614/CRAN.package.occCite
Author: Hannah L. Owens ORCID iD [aut, cre], Cory Merow ORCID iD [aut], Brian Maitner ORCID iD [aut], Jamie M. Kass ORCID iD [aut], Vijay Barve ORCID iD [aut], Robert P. Guralnick ORCID iD [aut], Damiano Oldoni ORCID iD [rev] (Damiano reviewed the package (v. 0.5.2) for rOpenSci, see <https://github.com/ropensci/software-review/issues/407>)
Maintainer: Hannah L. Owens <hannah.owens at gmail.com>
BugReports: https://github.com/ropensci/occCite/issues
License: GPL-3
URL: https://docs.ropensci.org/occCite/
NeedsCompilation: no
Additional_repositories: https://hrbrmstr.r-universe.dev
Language: en-US
Citation: occCite citation info
Materials: NEWS
CRAN checks: occCite results [issues need fixing before 2026-02-22]

Documentation:

Reference manual: occCite.html , occCite.pdf
Vignettes: Simple search and citation of occurrences (source, R code)
Advanced search and citation of occurrences (source, R code)

Downloads:

Package source: occCite_0.6.1.tar.gz
Windows binaries: r-devel: occCite_0.6.1.zip, r-release: occCite_0.6.1.zip, r-oldrel: occCite_0.6.1.zip
macOS binaries: r-release (arm64): occCite_0.6.1.tgz, r-oldrel (arm64): occCite_0.6.1.tgz, r-release (x86_64): occCite_0.6.1.tgz, r-oldrel (x86_64): occCite_0.6.1.tgz
Old sources: occCite archive

Linking:

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