CRAN Package Check Results for Maintainer ‘Edward Burn <edward.burn at ndorms.ox.ac.uk>’

Last updated on 2024-06-21 03:58:17 CEST.

Package ERROR NOTE OK
CodelistGenerator 13
CohortConstructor 13
CohortSurvival 13
IncidencePrevalence 2 1 10

Package CodelistGenerator

Current CRAN status: OK: 13

Package CohortConstructor

Current CRAN status: OK: 13

Package CohortSurvival

Current CRAN status: OK: 13

Package IncidencePrevalence

Current CRAN status: ERROR: 2, NOTE: 1, OK: 10

Version: 0.7.3
Check: package dependencies
Result: NOTE Imports includes 22 non-default packages. Importing from so many packages makes the package vulnerable to any of them becoming unavailable. Move as many as possible to Suggests and use conditionally. Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.7.3
Check: running R code from vignettes
Result: ERROR Errors in running code in vignettes: when running code in ‘a02_Creating_denominator_populations.Rmd’ ... > library(knitr) > library(here) here() starts at /private/var/folders/k4/0jwzxmln0nb8y6rkzprptb640000gq/T/RtmpLR5NYN/file102e3104edace/vignettes > knitr::include_graphics(here("vignettes/dpop1.png")) When sourcing ‘a02_Creating_denominator_populations.R’: Error: Cannot find the file(s): "/private/var/folders/k4/0jwzxmln0nb8y6rkzprptb640000gq/T/RtmpLR5NYN/file102e3104edace/vignettes/vignettes/dpop1.png" Execution halted when running code in ‘a04_Calculating_prevalence.Rmd’ ... > library(knitr) > library(IncidencePrevalence) > knitr::include_graphics(here("vignettes/point_prev.png")) When sourcing ‘a04_Calculating_prevalence.R’: Error: Cannot find the file(s): "/private/var/folders/k4/0jwzxmln0nb8y6rkzprptb640000gq/T/RtmpaVq8rN/file102f73f984015/vignettes/vignettes/point_prev.png" Execution halted when running code in ‘a05_Calculating_incidence.Rmd’ ... > library(knitr) > library(IncidencePrevalence) > knitr::include_graphics(here("vignettes/inc_no_rep_no_washout.png")) When sourcing ‘a05_Calculating_incidence.R’: Error: Cannot find the file(s): "/private/var/folders/k4/0jwzxmln0nb8y6rkzprptb640000gq/T/Rtmpx2izHd/file102fd10e65712/vignettes/vignettes/inc_no_rep_no_washout.png" Execution halted ‘a01_Introduction_to_IncidencePrevalence.Rmd’ using ‘UTF-8’... [8s/8s] OK ‘a02_Creating_denominator_populations.Rmd’ using ‘UTF-8’... failed ‘a03_Creating_target_denominator_populations.Rmd’ using ‘UTF-8’... [8s/8s] OK ‘a04_Calculating_prevalence.Rmd’ using ‘UTF-8’... failed ‘a05_Calculating_incidence.Rmd’ using ‘UTF-8’... failed ‘a06_Plotting_options.Rmd’ using ‘UTF-8’... [7s/7s] OK Flavor: r-oldrel-macos-arm64

Version: 0.7.3
Check: running R code from vignettes
Result: ERROR Errors in running code in vignettes: when running code in ‘a02_Creating_denominator_populations.Rmd’ ... > library(knitr) > library(here) here() starts at /private/var/folders/2b/t0kwbtmn3p7brv2mvx39c9cr0000gn/T/RtmpYV8kF0/file3ba95b7c1daa/vignettes > knitr::include_graphics(here("vignettes/dpop1.png")) When sourcing ‘a02_Creating_denominator_populations.R’: Error: Cannot find the file(s): "/private/var/folders/2b/t0kwbtmn3p7brv2mvx39c9cr0000gn/T/RtmpYV8kF0/file3ba95b7c1daa/vignettes/vignettes/dpop1.png" Execution halted when running code in ‘a04_Calculating_prevalence.Rmd’ ... > library(knitr) > library(IncidencePrevalence) > knitr::include_graphics(here("vignettes/point_prev.png")) When sourcing ‘a04_Calculating_prevalence.R’: Error: Cannot find the file(s): "/private/var/folders/2b/t0kwbtmn3p7brv2mvx39c9cr0000gn/T/RtmpPn85Yt/file3bbb3a6a40d6/vignettes/vignettes/point_prev.png" Execution halted when running code in ‘a05_Calculating_incidence.Rmd’ ... > library(knitr) > library(IncidencePrevalence) > knitr::include_graphics(here("vignettes/inc_no_rep_no_washout.png")) When sourcing ‘a05_Calculating_incidence.R’: Error: Cannot find the file(s): "/private/var/folders/2b/t0kwbtmn3p7brv2mvx39c9cr0000gn/T/RtmpSShQXa/file3bc142eb5d76/vignettes/vignettes/inc_no_rep_no_washout.png" Execution halted ‘a01_Introduction_to_IncidencePrevalence.Rmd’ using ‘UTF-8’... [15s/14s] OK ‘a02_Creating_denominator_populations.Rmd’ using ‘UTF-8’... failed ‘a03_Creating_target_denominator_populations.Rmd’ using ‘UTF-8’... [14s/14s] OK ‘a04_Calculating_prevalence.Rmd’ using ‘UTF-8’... failed ‘a05_Calculating_incidence.Rmd’ using ‘UTF-8’... failed ‘a06_Plotting_options.Rmd’ using ‘UTF-8’... [12s/12s] OK Flavor: r-oldrel-macos-x86_64