ips: Interfaces to Phylogenetic Software in R

Functions that wrap popular phylogenetic software for sequence alignment, masking of sequence alignments, and estimation of phylogenies and ancestral character states.

Version: 0.1.1
Depends: R (≥ 3.5.0), ape
Imports: data.table, dplyr, phangorn, plyr, rlang, tibble, XML
Published: 2026-07-08
DOI: 10.32614/CRAN.package.ips
Author: Christoph Heibl ORCID iD [aut], Natalie Cusimano [aut], Franz-Sebastian Krah [aut], Martin R. Smith ORCID iD [ctb, cre]
Maintainer: Martin R. Smith <martin.smith at durham.ac.uk>
License: GPL-3
URL: https://github.com/heibl/ips
NeedsCompilation: no
Language: en-US
Citation: ips citation info
Materials: README, NEWS
In views: Phylogenetics
CRAN checks: ips results

Documentation:

Reference manual: ips.html , ips.pdf

Downloads:

Package source: ips_0.1.1.tar.gz
Windows binaries: r-devel: ips_0.0.13.zip, r-release: ips_0.0.13.zip, r-oldrel: ips_0.0.13.zip
macOS binaries: r-release (arm64): ips_0.0.13.tgz, r-oldrel (arm64): ips_0.0.13.tgz, r-release (x86_64): ips_0.0.13.tgz, r-oldrel (x86_64): ips_0.0.13.tgz
Old sources: ips archive

Linking:

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