Last updated on 2026-10-29 09:59:11 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-fedora-gcc | 1.0.0 | 5.00 | 63.42 | 68.42 | OK | |
| r-release-macos-arm64 | 1.0.0 | 2.00 | 29.00 | 31.00 | ERROR | |
| r-release-macos-x86_64 | 1.0.0 | 6.00 | 148.00 | 154.00 | ERROR | |
| r-oldrel-macos-arm64 | 1.0.0 | OK | ||||
| r-oldrel-macos-x86_64 | 1.0.0 | 6.00 | 64.00 | 70.00 | OK |
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘test-bessel-i.R’ [0s/0s]
Running ‘test-direct-inla-lavm.R’ [1s/1s]
Running the tests in ‘tests/test-direct-inla-lavm.R’ failed.
Complete output:
> if (requireNamespace("INLA", quietly = TRUE)) {
+ # INLA exposes the BLAS thread limit as an option, not a fitting argument.
+ INLA::inla.setOption(blas.num.threads = 1L)
+ # INLA only needs to be installed. Its namespace is loaded on demand; users
+ # do not have to attach it with library(INLA).
+ stopifnot(!"package:INLA" %in% search())
+ suppressPackageStartupMessages(library(INLAcircular))
+
+ stopifnot(identical(inla, INLAcircular::inla))
+
+ set.seed(20260816)
+ n <- 60
+ z <- rnorm(n)
+ y <- rlavm(n, eta = 0.75 + 1.25 * z, kappa = 50)
+
+ fit <- inla(
+ y ~ z,
+ family = "lavm",
+ data = data.frame(y = y, z = z),
+ num.threads = "2:1",
+ control.family = list(
+ list(
+ link = "inverse.tangent",
+ hyper = list(
+ kappa = list(
+ initial = log(50),
+ prior = "pc.vminf",
+ param = c(0.5, 0.5),
+ fixed = FALSE
+ )
+ )
+ )
+ )
+ )
+
+ stopifnot(
+ inherits(fit, "inla"),
+ identical(fit$INLAcircular$requested.family, "lavm"),
+ identical(fit$INLAcircular$internal.family, "cloglike"),
+ identical(fit$INLAcircular$prior[[1L]], "pc.vminf(0.5, 0.5)"),
+ all(c("(Intercept)", "z") %in% rownames(fit$summary.fixed)),
+ "kappa for lavm observations" %in% rownames(fit$summary.hyperpar)
+ )
+ }
Error in match.arg(option, several.ok = FALSE) :
'arg' should be one of "inla.call", "inla.arg", "fmesher.call", "fmesher.arg", "num.threads", "smtp", "safe", "keep", "verbose", "save.memory", "internal.opt", "working.directory", "silent", "debug", "show.warning.graph.file", "scale.model.default", "short.summary", "inla.timeout", "fmesher.timeout", "inla.mode", "malloc.lib", "fmesher.evolution", "fmesher.evolution.warn", "fmesher.evolution.verbosity", "INLAjoint.features", "numa"
Calls: <Anonymous> -> do.call -> <Anonymous> -> match.arg
Execution halted
Flavor: r-release-macos-arm64
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘test-bessel-i.R’ [0s/1s]
Running ‘test-direct-inla-lavm.R’ [2s/5s]
Running the tests in ‘tests/test-direct-inla-lavm.R’ failed.
Complete output:
> if (requireNamespace("INLA", quietly = TRUE)) {
+ # INLA exposes the BLAS thread limit as an option, not a fitting argument.
+ INLA::inla.setOption(blas.num.threads = 1L)
+ # INLA only needs to be installed. Its namespace is loaded on demand; users
+ # do not have to attach it with library(INLA).
+ stopifnot(!"package:INLA" %in% search())
+ suppressPackageStartupMessages(library(INLAcircular))
+
+ stopifnot(identical(inla, INLAcircular::inla))
+
+ set.seed(20260816)
+ n <- 60
+ z <- rnorm(n)
+ y <- rlavm(n, eta = 0.75 + 1.25 * z, kappa = 50)
+
+ fit <- inla(
+ y ~ z,
+ family = "lavm",
+ data = data.frame(y = y, z = z),
+ num.threads = "2:1",
+ control.family = list(
+ list(
+ link = "inverse.tangent",
+ hyper = list(
+ kappa = list(
+ initial = log(50),
+ prior = "pc.vminf",
+ param = c(0.5, 0.5),
+ fixed = FALSE
+ )
+ )
+ )
+ )
+ )
+
+ stopifnot(
+ inherits(fit, "inla"),
+ identical(fit$INLAcircular$requested.family, "lavm"),
+ identical(fit$INLAcircular$internal.family, "cloglike"),
+ identical(fit$INLAcircular$prior[[1L]], "pc.vminf(0.5, 0.5)"),
+ all(c("(Intercept)", "z") %in% rownames(fit$summary.fixed)),
+ "kappa for lavm observations" %in% rownames(fit$summary.hyperpar)
+ )
+ }
Error in match.arg(option, several.ok = FALSE) :
'arg' should be one of "inla.call", "inla.arg", "fmesher.call", "fmesher.arg", "num.threads", "smtp", "safe", "keep", "verbose", "save.memory", "internal.opt", "working.directory", "silent", "debug", "show.warning.graph.file", "scale.model.default", "short.summary", "inla.timeout", "fmesher.timeout", "inla.mode", "malloc.lib", "fmesher.evolution", "fmesher.evolution.warn", "fmesher.evolution.verbosity", "INLAjoint.features", "numa"
Calls: <Anonymous> -> do.call -> <Anonymous> -> match.arg
Execution halted
Flavor: r-release-macos-x86_64