CRAN Package Check Results for Package ICESat2VegR

Last updated on 2026-10-02 10:57:08 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.0.2 112.69 369.28 481.97 ERROR
r-devel-linux-x86_64-debian-gcc 0.0.3 79.19 288.33 367.52 OK
r-devel-linux-x86_64-fedora-clang 0.0.3 98.00 279.74 377.74 OK
r-devel-linux-x86_64-fedora-gcc 0.0.3 90.00 247.03 337.03 OK
r-devel-windows-x86_64 0.0.3 199.00 1027.00 1226.00 OK
r-patched-linux-x86_64 0.0.3 111.81 394.73 506.54 OK
r-release-linux-x86_64 0.0.2 112.37 345.13 457.50 ERROR
r-release-macos-arm64 0.0.3 30.00 81.00 111.00 OK
r-release-macos-x86_64 0.0.3 89.00 349.00 438.00 OK
r-release-windows-x86_64 0.0.3 181.00 950.00 1131.00 OK
r-oldrel-macos-arm64 0.0.3 36.00 93.00 129.00 OK
r-oldrel-macos-x86_64 0.0.3 86.00 352.00 438.00 OK
r-oldrel-windows-x86_64 0.0.2 289.00 1221.00 1510.00 OK

Additional issues

gcc-ASAN valgrind

Check Details

Version: 0.0.2
Check: examples
Result: ERROR Running examples in ‘ICESat2VegR-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: ATL03_ATL08_photons_attributes_dt_join > ### Title: Join ATL03 and ATL08 photons attributes > ### Aliases: ATL03_ATL08_photons_attributes_dt_join > > ### ** Examples > > if (requireNamespace("hdf5r", quietly = TRUE)) { + # Specifying the path to ATL03 file + atl03_path <- system.file("extdata", + "atl03_clip.h5", + package = "ICESat2VegR" + ) + + # Specifying the path to ATL08 file + atl08_path <- system.file("extdata", + "atl08_clip.h5", + package = "ICESat2VegR" + ) + + # Reading ATL03 data (h5 file) + atl03_h5 <- ATL03_read(atl03_path = atl03_path) + + # Reading ATL08 data (h5 file) + atl08_h5 <- ATL08_read(atl08_path = atl08_path) + + # # Extracting ATL03 and ATL08 photons and heights + atl03_atl08_dt <- ATL03_ATL08_photons_attributes_dt_join(atl03_h5, atl08_h5) + head(atl03_atl08_dt) + + close(atl03_h5) + close(atl08_h5) + + } | | | 0% | |================== | 25%Error in (function () : id is invalid Calls: ATL03_ATL08_photons_attributes_dt_join ... <Anonymous> -> standalone_H5D_get_type -> <Anonymous> Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.0.2
Check: examples
Result: ERROR Running examples in ‘ICESat2VegR-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: ATL03_ATL08_photons_attributes_dt_join > ### Title: Join ATL03 and ATL08 photons attributes > ### Aliases: ATL03_ATL08_photons_attributes_dt_join > > ### ** Examples > > if (requireNamespace("hdf5r", quietly = TRUE)) { + # Specifying the path to ATL03 file + atl03_path <- system.file("extdata", + "atl03_clip.h5", + package = "ICESat2VegR" + ) + + # Specifying the path to ATL08 file + atl08_path <- system.file("extdata", + "atl08_clip.h5", + package = "ICESat2VegR" + ) + + # Reading ATL03 data (h5 file) + atl03_h5 <- ATL03_read(atl03_path = atl03_path) + + # Reading ATL08 data (h5 file) + atl08_h5 <- ATL08_read(atl08_path = atl08_path) + + # # Extracting ATL03 and ATL08 photons and heights + atl03_atl08_dt <- ATL03_ATL08_photons_attributes_dt_join(atl03_h5, atl08_h5) + head(atl03_atl08_dt) + + close(atl03_h5) + close(atl08_h5) + + } | | | 0% | |================== | 25%[1] "Couldn't delete 360287970189639792" Error in self$get_ref() : HDF5-API Errors: error #000: ./src/H5I.c in H5Iget_ref(): line 472: can't get ID ref count class: HDF5 major: Object ID minor: Can't get value error #001: ./src/H5Iint.c in H5I_get_ref(): line 1405: can't locate ID class: HDF5 major: Object ID minor: Unable to find ID information (already closed?) Calls: ATL03_ATL08_photons_attributes_dt_join ... <Anonymous> -> initialize -> <Anonymous> -> <Anonymous> -> .Call Execution halted Flavor: r-release-linux-x86_64