a10a976d3ee2fe8b3e3c82abca5002df *DESCRIPTION
7889585620631971d42a319fc14e52a7 *NAMESPACE
bbbca0f17698a041d3fc35bfd1737d7e *R/AAmass.R
40a90be8e3fad6951b8827a65da9229a *R/AucRoc.R
eb1de52bae30adcce2f4df2d2bbb374f *R/cleanListCoNames.R
d3be7a7a68d7ffee391dc71ddb94d9d3 *R/combineMultFilterNAimput.R
3cc1a49e2f851f5aeaa395af2067094a *R/convAASeq2mass.R
0181da8e1a59fab60490a6b655afd81d *R/corColumnOrder.R
5cfdb2d5031b31515466a35032b81ed8 *R/countNoOfCommonPeptides.R
19ecd167dc5230a0c1b072ff6d6f8005 *R/extrSpeciesAnnot.R
52909d6451ddcc18176a96403c136e52 *R/massDeFormula.R
0fe454c0e6eccf247f19550032badb03 *R/matrixNAinspect.R
609b310b3903a5fcd0e2af4033acf23d *R/matrixNAneighbourImpute.R
3610df80c3552df5d5265b4b2ce65108 *R/plotROC.R
f0e9070a6acc20554f57f85f211a1835 *R/razorNoFilter.R
fe91cc9d5b31edd9c47f069746936052 *R/readFasta2.R
8badf01a8061e3ca7e18eceefbc59d90 *R/readMaxQuantFile.R
81be729dfa43285ccb9278d35c602056 *R/readPDExport.R
56094c6c8df8157e385520a58794cf2a *R/readProlineFile.R
95065c3978b4210de7ccde8a57b135d9 *R/readUCSCtable.R
f9561e1749cae60f5b2b2df3735f4bb2 *R/readUniProtExport.R
5f98bc42fc25b535af3862e6682dbacc *R/removeSampleInList.R
7fe03d17b14a2051c9136a46abeb59a8 *R/summarizeForROC.R
4fe5b5b300287591792640c6a880d41b *R/test2grp.R
eee97a021f60aff44fdb251570675ce6 *R/testRobustToNAimputation.R
a75c51084c1c6eb244c76f21270b956e *build/vignette.rds
9d8b7bd71dffd5d13f39cba4c07a8ecf *inst/doc/wrProteoVignette1.R
fe090c280c5667dca9fe43b93311734f *inst/doc/wrProteoVignette1.Rmd
f8eefed37ac941edba171515c77ffb0f *inst/doc/wrProteoVignette1.html
b4fe1b4367847485045b8b5671dfe29c *inst/doc/wrProteoVignetteUPS1i.R
15da4d0cf9912afbbbbd31baaad63072 *inst/doc/wrProteoVignetteUPS1i.Rmd
589b62bbe93cf7404662364254a4bf24 *inst/doc/wrProteoVignetteUPS1i.html
e47702a50859eb1583c69d82dc55a560 *inst/extdata/UCSC_hg38_chr11extr.gtf
1ec7e9c3460fc02d1aaad651db2d31f0 *inst/extdata/conta1.fasta
ecce9c03a56859d9d2e35f6a8c7ac3c7 *inst/extdata/deUniProt_hg38chr11extr.tab
7f203ff7630ee1a64f64abd578a4a95a *inst/extdata/exampleProlineABC.csv
b0cdae56c0b0f04942f5419d6cb6247b *inst/extdata/exampleProtDiscov1.txt
6809d797775a55470418e587177b295d *inst/extdata/exampleProtDiscov1_Rheader.txt
dea89089f5990069385410af0905886e *inst/extdata/proteinGroups.txt.gz
ae0fdc47678b03526412284f314345d1 *inst/extdata/proteinGroupsMaxQuantUps1.txt
393f403f2829db9fe4ff28794a423633 *inst/extdata/pxd001819_PD24_Proteins.txt.gz
0bc6edec4fa8f2b3a55c0e7b6ac4ffc6 *inst/extdata/pxd001819_PL.xlsx
2ba297645a23c316ca23096df61d35b6 *man/AAmass.Rd
169fc7466b020ea8577d342fb7e6aa57 *man/AucROC.Rd
935e963a58c4e13c29a3a4045782acd4 *man/cleanListCoNames.Rd
8b64b8b4be7c2daf6a51a166ada06e6b *man/combineMultFilterNAimput.Rd
2b62e6585e9b7be5f947cd69a389fc98 *man/convAASeq2mass.Rd
dc5f25c14f8fd0e85402e73b758d9efc *man/corColumnOrder.Rd
d31b74afc72f2f4402dc4cb400969ace *man/countNoOfCommonPeptides.Rd
d8890fcdf0d3e999ff175e57e4b5eea9 *man/extrSpeciesAnnot.Rd
30ad142dbfc55c96626fd661cd6aa78d *man/massDeFormula.Rd
7612e9caa393198fc5ae21ed8e9c6efc *man/matrixNAinspect.Rd
9bf3c8f26444a06988e371d4cd154eb0 *man/matrixNAneighbourImpute.Rd
fecd7f8fa3320e69c08e5b3c886bfbb5 *man/plotROC.Rd
9de5c2765b0547aed8ed034a0516b03b *man/razorNoFilter.Rd
1702a7eec90082b790d16d1b54f3f7dc *man/readFasta2.Rd
f6046478888047ec8cddb322cb9368bf *man/readMaxQuantFile.Rd
fd6d938eb6056e075d2631f62115e431 *man/readPDExport.Rd
767daf143a23740caebb81f46673fb2d *man/readProlineFile.Rd
7aa7295eee1b9cbc0cc6183879b4f22f *man/readUCSCtable.Rd
d2e226840a77f647839bd05a3907e9fd *man/readUniProtExport.Rd
8f055452f12a5e6ba45558f194de4b80 *man/removeSampleInList.Rd
b573520400f4ce3d7d627ef256daf4ad *man/summarizeForROC.Rd
1b9eee5ff8fab7ff07859ca3880b8106 *man/test2grp.Rd
b08c789177fc7b2ac20b16a7f7d1cd36 *man/testRobustToNAimputation.Rd
fe090c280c5667dca9fe43b93311734f *vignettes/wrProteoVignette1.Rmd
15da4d0cf9912afbbbbd31baaad63072 *vignettes/wrProteoVignetteUPS1i.Rmd
