e638e26b8107fd0ee218a5598db1e162 *DESCRIPTION
a998a5dfbfbf4dfca4c7ae178b5bea5b *NAMESPACE
d0be7a679ba9756e73d773cd7cf409e3 *R/0_imports.R
e8599cd09cfba3b3950bf416fd771a62 *R/1_allclasses.R
3d93603cc809bc4f01b2fc941ede0993 *R/2_all_generics.R
5b60d3cbda2d5f36d5ecf741fb0d1d21 *R/4_methods.R
802183b01617088a63cb1c1e3e333bca *R/5_methods_genotype_data_subset.R
0c5c0b42cb4f6f5a95c8e6ac8012cb9c *R/associations.R
c03c6a57b4d7fb188450cf89ad05bd70 *R/biomart_annots.R
a4bcc233306b8d1b9c84aae8971cddd3 *R/fetch_hgdp.R
7e6107a327af2c319ed16d6ee610f0fd *R/geno_data_convert.R
9d01a7524162ce2f1f9c13533a9e3894 *R/geno_data_fetch.R
76c49b6b3cb16f36e1a3c3c92130cc89 *R/ggplots_ld.R
6713884fbd3facc104b216dbe853a3ca *R/gtable_associations.R
cbbb07e4f78ad60fae6994258e4ad563 *R/gtable_ld.R
b4fe12876c37f8a22cde06e9701eecf0 *R/snplinkage-package.R
8de8a9a444a2751fcb01caa21d6c4c68 *R/snprelate_ld.R
be1ffdaf73720356ac5ca59da436e288 *R/snprelate_qc.R
249c5dd663f0f6746b7980140a2333ba *R/utils.R
439bf689fa27cf9affd0335332142165 *build/partial.rdb
79a4cca62315876d2adea22b4678dd02 *build/vignette.rds
5589cbd8cb561243a3e03b5b9b2e7c4a *inst/doc/snplinkage.R
5767060077f896639dc4bb5b79dca4ae *inst/doc/snplinkage.Rnw
e4c1fd4957ba907685b1738a8228ca29 *inst/doc/snplinkage.pdf
eb0b80b828f902c85e01bab1a244f386 *inst/extdata/bmart_meta.rds
7ac23c72a8c313e571b2940c70c07f5d *inst/extdata/hgdp.txt
65c6876d49a1b483ec086210a056c90e *inst/extdata/hgdp.zip
bfa49dfbce307d6cd4cbbf19eb4fdbd3 *inst/script/fetch_and_reduce_hgdp.R
d42c246acd14124deee3ee7c3161cf29 *man/chisq_pvalues.Rd
7a83626b9750a1cfae65b28edcc77b68 *man/chisq_pvalues_gdata.Rd
b897a72554f65f5dc7da88275bc4efbb *man/compound.Rd
70718412cd8f58aad54fd96b67ffd75e *man/diamond_annots.Rd
af015db34e796fd7090e25258f8ac723 *man/exposition.Rd
2c21740161d929299729a80cb9e844e7 *man/gdata_add_gene_annots.Rd
647001d11eeebdb607f1d55def2dc4e8 *man/gdata_add_gene_annots_aim_example.Rd
b7238429159cc763951dde41af482f3e *man/gdata_add_gene_annots_hladr_example.Rd
8e18cf614c4a491d0617b5a1c6dbfeac *man/gdata_scans_annots.Rd
045033a5177e993c7e0b2cd9a8be5dda *man/gdata_snps_annots.Rd
e17bf68b59e0e71f05d9855af53aa2da *man/get_biomart_metadb.Rd
c592940f18c94bd602ad2b25b7cfd32e *man/ggplot_associations.Rd
9cc24cc3f8f68c984a3deb1f859af24d *man/ggplot_ld.Rd
72e03ebaef394edf5df2b94ea3626dc4 *man/ggplot_snp_pos.Rd
489beb2245364880175434349a4ab758 *man/gtable_ld.Rd
f88ab5c6f5d324b87ad81dbaa2853b46 *man/gtable_ld_associations.Rd
cdf96ac052a4724abdce31d6a202ae86 *man/gtable_ld_associations_gdata.Rd
447991e2d809a9d4f82aa51a3b66b4e4 *man/gtable_ld_gdata.Rd
308e84340dafce722f05813e0451c342 *man/load_gds_as_genotype_data.Rd
6001f65e4d90070b9678daccb027ab07 *man/parallel_apply.Rd
d7b42bac07db2a2aa287114ec34cbdca *man/pipe.Rd
edd3bfe2b31fa4d7bf576c97597d2e82 *man/print_qc_as_tex_table.Rd
b34978329181fe02025552f43a0958a8 *man/save_hgdp_as_gds.Rd
a5c84274d677c91224312605b822ad48 *man/select_region_idxs.Rd
1be0707d118454e77781ee4230fdf85f *man/snplinkage-package.Rd
0dc231fff435be75de3e5c614b4c71a5 *man/snprelate_allele_frequencies.Rd
6daa3aec28f74c975ff40f52c318519a *man/snprelate_ld.Rd
21289bc38aa15ee1d6344cabdd579add *man/snprelate_ld_select.Rd
7e1e74d36b5c09e7446f681f49ca2c28 *man/snprelate_qc.Rd
af9a41c124fc139435fd0dc3bc9cdcab *tests/testthat.R
276ff9a1fd8c8449ab73d9cad5e4f28e *tests/testthat/test-geno_data.R
bbdad82395ab1692de0356f5b9711cfa *tests/testthat/test-ggplots_ld.R
db4e6662f5bb9ed0476ec546eab9c5c9 *tests/testthat/test-snprelate_ld.R
eca79e0c7af81e6267ad1048f3ae586e *tests/testthat/test-vignette.R
3480c0530a171a9fecb7ced8b8660d8e *vignettes/biblio.bib
5767060077f896639dc4bb5b79dca4ae *vignettes/snplinkage.Rnw
