d20f65117418249dc95cb85cf8bfa2fd *DESCRIPTION
0e42faac037dd57f64f417674b34edc1 *NAMESPACE
a2348587da83232fc0967630f5c36c6a *R/PTM_MarkerFinder.R
ca7c302d700baae0c16bfc3cb99bfe9f *R/de_novo.R
55b7d26cda407b8d443cdd0d4716ff07 *R/deisotoper.R
6dd64a42c0776c7d3096b46b8133117b *R/findNN.R
07cb327a38be94151c6c271bdb06f95b *R/findNN_.R
bac2a71101497885892b14c3d7e2ab30 *R/fragmentIons.R
3e12ad442bd3a3a4ed9e46a103a29334 *R/genMod.R
e955a60e64b535d3e1f0734ee2a03e4d *R/iTRAQ2GroupAnalysis.R
1d8946a7f9c0535d4b42926486cf66d5 *R/lcmsmap.R
cc23ef22d323a8337271db09ee61b1d4 *R/mdp.R
01930f71a6fe4c0004fad207944a3b8f *R/parentIonMass.R
55bca391ca167b52a539e12e8db1968f *R/peakplot.R
342c673478793ed83bf529ebda9ae312 *R/pgImporter.R
7e60e7cb31e44d1d1066d5050e8dead1 *R/pgLFQ.R
67359cbe64a303144ae48f73d7419937 *R/pp.R
19f4243d9a1043cb5e0901a27630a883 *R/psm.R
1b3acd8b1f3de626b4dd39c80bad4fe8 *R/swath.R
3884f8cc932148e7ce1cdbbe7814c866 *build/vignette.rds
ee689bb4ed5f55e8408f41dfa74d1aeb *data/AA.RData
f7159254345b591b26289b4ad0893a57 *data/HexNAc.RData
2111a35d5fe7abbce2a8a6851614a4b7 *data/averagine.RData
c82c69632586fd10c778e7586763fdad *data/datalist
567496d0b170d8a9b8f7a8e46a5666d6 *data/fetuinLFQ.RData
6a526d162aad678c67330180698e2c11 *data/iRTpeptides.RData
fa0b8c335f778cfbc63c642e83eace97 *data/iTRAQ.RData
d2cb1add76b984a3d3a54b3fbaa95b03 *data/msms.RData
4760069655c8176817d9887a91a49aef *data/pgLFQfeature.RData
b44ec11a0e23e4c83bac5f04ab097a33 *data/pgLFQprot.RData
78591ad18d778050a95ab66702f9c3dc *data/pressureProfile.RData
daa9c303936ebe822c0bfbebf6bd6733 *demo/00Index
d553d739fc6b78566ed04444d0a461df *demo/PTM_MarkerFinder.R
a24b7713a39a11be812e4da97aa9d633 *demo/peakplot.R
e8e6de925245a465d2ac421ee0628597 *demo/pressureProfile.R
950fc7588fa2221d07ea26e4eb46a116 *demo/quantification.R
9ea0bf0729637270f3d4def4dcd74729 *exec/protViz_bibliospec2RData.py
386ed045a439e0339d35262e9d719450 *exec/protViz_dat2R.bash
a06f770fd5aa40649edfac720ce8cc6d *exec/protViz_fun.bash
445006929eb20f78f61818fa48037c71 *exec/protViz_mascotDat2RData.pl
2b33449ccf2643611954fec0f4f5cf60 *exec/protViz_mgf2RData.pl
a522ed667afe63761093cc378ce7f5f5 *inst/doc/PTM_MarkerFinder.R
6fbccef02442cf6de72f6873cd49bdde *inst/doc/PTM_MarkerFinder.Rnw
10ddd9d050da111b24f23e29d04bd113 *inst/doc/PTM_MarkerFinder.pdf
9e75d5fbc9910ca8b1f8fa1c39304a91 *inst/doc/protViz.R
a321c1993623771a2035b4090e0f0715 *inst/doc/protViz.Rnw
3319c82bfa6070ede8bd58b2b20fdf86 *inst/doc/protViz.pdf
9e862547b1dfb45463a1e03e389b8361 *man/AA.Rd
7c991c49284819c1e7e26fb98c8fdd50 *man/HexNAc.Rd
9c7dc2862de59ae67d14c2103ea379df *man/PTM_MarkerFinder.Rd
23b1bc60ffd8529d3e8041b787656e99 *man/PTM_MarkerFinder_util.Rd
489d35474a3d7cada544fe83b0edcee4 *man/averagine.Rd
b164fa16c5abdbd02328de98905ef623 *man/de_novo.Rd
70e9e5150f3c83caab30f95afb38ce85 *man/deisotoper.Rd
a61b49e4c574c28df134635ad3d3b0a3 *man/fetuinLFQ.Rd
82f534e54db0f4fe114185c5f5733437 *man/findNN.Rd
8f40a136d0cbb23143b2a97c277aae27 *man/findNN_.Rd
f0d68488165d869bbfcc97d87e740a17 *man/fragmentIons.Rd
3f2228152c2bb7caff29ea9e450bd78c *man/genMod.Rd
17dfd02637a460a2a333f75ca66e594c *man/iRTpeptides.Rd
2e31ca5b84385e4b4f73073444a22cda *man/iTRAQ.Rd
c849ce9d6aaac21264721286b0a618b1 *man/iTRAQ2GroupAnalysis.Rd
96b262e9ddd0a61ff47403d5caa71322 *man/lcmsmap.Rd
71c22b57ffb7789db6cb367f1e084d80 *man/mdp.Rd
3fa37904e15542a9d8047313c354b249 *man/msms.Rd
fd75f35f293a0e62ec5a2831daa3fe95 *man/parentIonMass.Rd
23cd815d1640d5351dbd4cd9bbabad18 *man/peakplot.Rd
a41003b07860d285e922dfbfaded7fff *man/pgImporter.Rd
94216a2c8bdf765e9c6a2acb305101cf *man/pgLFQaov.Rd
90160c4ae4961414e36744d72b8f83bb *man/pgLFQfeature.Rd
d5868088a1788699f969461527899b27 *man/pgLFQprot.Rd
57487772317b6f64a97db714173e7cb4 *man/pgLFQtNpq.Rd
8cee211c76eec2b80625377908f9316f *man/ppp.Rd
e73d6869e195acbe8c372b2213772f3c *man/pps.Rd
4ca6d1cf44e7392671a03781f3887f2f *man/pressureProfile.Rd
944582dcdd9acd33de3a85fc1de08447 *man/psm.Rd
32d7e6fd8c550006f7c69a4bffd3bfc5 *man/swath.Rd
2c3deec9884288bc89780375d51d87ff *src/Makevars
50a44be6576ceac81eba316e102275cb *src/aa2mass.cpp
7ed16d8640f6152e015319c911fb3a07 *src/base/chemistry/iisotopeenvelope.h
05a375ea97435ce2e4a998486295a86f *src/base/ms/deisotoper.h
f8cc7903801847e3d5d5741080394e51 *src/computeFragmentIons.c
2eb68eb45f99d8b029c70abb220b5110 *src/computeParentIonMass.c
ea672b82be0799c29870e6588cba2d2d *src/deisotoper.cpp
f909e8c0f343652d2d9e61e9923a1655 *src/fcat.c
fd255b24f2e9908d4840e83a118fc830 *src/findNN.c
b50df512b612f7087642f911cec17a1d *src/findNN_.cpp
265fcc1e7bce29dcd2779d4da9e27270 *src/rcppdeisotoperenvelope.h
2c5bce8429efbbb5b3b6a81492a21b3a *src/tryptic-digest.c
6fbccef02442cf6de72f6873cd49bdde *vignettes/PTM_MarkerFinder.Rnw
a321c1993623771a2035b4090e0f0715 *vignettes/protViz.Rnw
389e1eb3e1ceaee3b6ab9010c17c04f8 *vignettes/protViz.bib
