a89c0675295be277b1f0722d5d241670 *DESCRIPTION
111d193993ba29fd313d3cd11e62ff23 *NAMESPACE
90a427ccf5fc315f648f9dd57c4ec242 *NEWS.md
84361ef5e5fe2095a35275ed1e4a108b *R/createDF.R
a79f5f3035f398ba2717d4ac6c19c818 *R/data.R
05bdd7a3535e32fc7cfa408ef1d50fae *R/filterProteins.R
14961728acb817ad50942c67f05f1f0f *R/findDE.R
f5d9f942a510553f75965a325e3c918d *R/handleNA.R
62564d05752580e3b7e2b9932ce0c574 *R/handleTechReps.R
6f3b425d8bbb22659e610ab0af912443 *R/imputeFunctions.R
53b667a7244d890f1e9ccbf4afa4916c *R/modelPlots.R
29448d63feb6d32de7957058e5b6e028 *R/modelProteins.R
7d2d1d252301669e56727dde3eb4e7ab *R/normalize.R
88bd0d423afe81e3b425067bb5ed8158 *R/utils.R
afce5907586cb15143422590d1d3b55d *README.md
64708079cdc6ec6935c611c132f2e00f *build/vignette.rds
9888e0073be095045efe24ccdd2dbb9d *data/covid_fit_df.rda
d59fc812130667175b1376b81fc7b798 *data/covid_norm_df.rda
43369902cbe7c834c09c037faec7555d *data/ecoli_fit_df.rda
f12b103bb98d5e1d2856e07e1e3a5bb9 *data/ecoli_norm_df.rda
4dd5971f44dcbc3281db8924abe052b2 *inst/CITATION
6f316f0554786a6baae1265f10f7e0e7 *inst/doc/intro_to_promor.R
4ace5f7557c3ff897dff3fa8bc78924e *inst/doc/intro_to_promor.Rmd
c4e461afbfa525ce323b2c61c4ebc7c6 *inst/doc/intro_to_promor.html
0d2e70e37d52db86ddee40876998d5b2 *man/aver_techreps.Rd
8ba694a0e81d2b973b2569cc1ec98456 *man/corr_plot.Rd
9768cef1db129ab57919cb9d8cb92ed6 *man/covid_fit_df.Rd
765732b19e5003b326464840c581be6c *man/covid_norm_df.Rd
0d0ce1a1dd9f67f17968c9729b08c527 *man/create_df.Rd
768cccc7ab64548649db3b8aa4e4797a *man/ecoli_fit_df.Rd
6a2e85137436dd8171a4a17352a1133b *man/ecoli_norm_df.Rd
f28c40767937754bb4bf37066161c902 *man/feature_plot.Rd
665f4cc6b0687550503ac64cdbb153ec *man/figures/README-rocplot-1.png
6ae1566d8053d8b5f21e00ed882e1d5c *man/figures/README-volcanoplot-1.png
6f37ff34f407a7d46c4a6f5f9de3633e *man/figures/logo.png
58de15263045ad409eb409b5ec6dbcf8 *man/figures/promor_ProtAnalysisFlowChart_small.png
1291922169925353c98f8dfb544c96b7 *man/figures/promor_ProtAnalysis_notechreps_small.png
9ec3bbb09f1e5a909054439a6d0bf207 *man/figures/promor_ProtAnalysis_techreps_small.png
a7037a8803eae65058f19f09e63c3aff *man/figures/promor_ProtModelingFlowChart_small.png
20f8710da5af9ba7c6c0d6b9515e931c *man/filterbygroup_na.Rd
2837146aef3e79d3bb171212a1d0fabc *man/find_dep.Rd
6ff03b2944a2a5c2ac78ba0fbd84f95c *man/heatmap_de.Rd
4f2a62964960d98a6af754277a2d14cb *man/heatmap_na.Rd
5d6366e17e654c12ed4dbf0f5ba0ebd0 *man/impute_na.Rd
2c3bcaa786b6323728dadb8fe6419920 *man/impute_plot.Rd
9fbe7ab7aac73b791bf3d66f49faafc5 *man/norm_plot.Rd
14361a2f96acfa6ec0cf5fbf07ceee38 *man/normalize_data.Rd
a889d4f34b0efb5764478157648e0084 *man/onegroup_only.Rd
77f8c69ae31d61faeebf60825fef9abd *man/performance_plot.Rd
0ca8a42d09780893a61d85e5b5aa2e93 *man/pre_process.Rd
9ec3d69fcd509f75b9825d993d54327c *man/rem_feature.Rd
047b984bb6b0a01376633f269c6505e1 *man/rem_sample.Rd
7e7f82d8036d86edb0696301ee48a4da *man/roc_plot.Rd
3909a99734bf1b81ac7cb1b0c839fa07 *man/split_data.Rd
0c6f143df57585ec0248b9036cc63e6b *man/test_models.Rd
9ee77bc51f223d2e8d5567d781fc93d2 *man/train_models.Rd
a32d12e820c38d1815eaa4b160790970 *man/varimp_plot.Rd
dacaf216258b7437f56689f9e633430f *man/volcano_plot.Rd
0f6f93df30e63b92616678c29e47a6bd *tests/testthat.R
01ffcd08423bb5bbb3f1fd8164c054ba *tests/testthat/test-protein_analysis.R
f7510fabb8c701542add534f4cb6b723 *tests/testthat/test-protein_modeling.R
5f17521b2819507b4ee27e2bba01da70 *tests/testthat/testdata/fake_fit.RDS
867dfb47aa17464a54e48e852026b6bd *tests/testthat/testdata/fake_fit_df.rds
104fdc5be7b31c718d37b92ea4e649e5 *tests/testthat/testdata/test_expdesign.txt
282600174fc38164c4cbf5fd32bc8868 *tests/testthat/testdata/test_expdesign_tr.txt
9e896e5a356c7d980a051cedf2d77a98 *tests/testthat/testdata/test_model_list.RDS
8621b3fba8308033e607f5a3fb3d526e *tests/testthat/testdata/test_protgroups.txt
0d50e19291ab78d3c1d1314d6b6f4e37 *tests/testthat/testdata/test_protgroups_tr.txt
4ace5f7557c3ff897dff3fa8bc78924e *vignettes/intro_to_promor.Rmd
c1e0e106d94caf5a7510cbc7fbbbf9bd *vignettes/promor_for_modeling.R
23175415d133c557ce310e72685326f9 *vignettes/promor_no_techreps.R
a539759bbf8ccf8cf2fb01d1bd26d671 *vignettes/promor_with_techreps.R
