92fc2f6fb97ee9b12a8cb338e72cf3f6 *DESCRIPTION
5eccd9cda48b41d6492292e3f5f874a6 *NAMESPACE
07a8fd58e98f47cf27fa611b75de3849 *NEWS.md
2180b88a6a7841891ce5c4efb2ab830b *R/RcppExports.R
ade2cd36232f20736500cfd5b522b413 *R/cache_twopts.R
e20ee50b105b66ac7b1dd93cff93e87c *R/calc_genoprob.R
454590aa3533701470e85dc8000de159 *R/calc_genoprob_dist.R
62be31aa287f6e44bb5691780cfa828f *R/calc_genoprob_error.R
14735763dc218c0e9fd8d3ec3b601367 *R/calc_genoprob_one_parent.R
5daee8660c1665410f1d3efdd2e3f894 *R/check_phase_configurations.R
4c1bac32b20c907045a0adca575c36da *R/data.R
f7b0733f76ad803bd777fa13b74cbf47 *R/eliminate_redundant.R
66e1e8abef62b21f541a05bfe6b2b950 *R/est_map_hmm.R
9a6dffe7b6e37afe0de526036ffcc688 *R/export_map_list.R
9a9ada13a4dd76b142b738223733fd85 *R/export_qtlpoly.R
585946dae62859a7b457482f7d9428ae *R/filters.R
6537bb0f96ee4641906260231cc50477 *R/find_blocks.R
ff1ab49722111fe1ceb4bf12ce91d80d *R/get_counts.R
d6339748af5fced121276946385e927c *R/get_counts_from_web.R
dc86827dd78ea8c1917930314d73e740 *R/get_submap.R
1b25a36d93f99d513faaa3ce3f31a097 *R/group.R
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841a8d525c5d4511b9669b0f4ab4ecd8 *R/homolog_probs.R
5233026150e0444ff9f52d12bd23ecf5 *R/import_from_polymapR.R
1e2938b2026fed3f95f902b64d4e02a7 *R/import_from_updog.R
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745d12731c1ac662e1f3b4a900d9634c *R/mds.R
725cc9bd3857abbc921f29fcafd5a158 *R/merge_maps.R
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21988a699359abd0c0f5211e8d78117b *R/plot_map_list.R
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f8acf559b5f889133fd2cb5824e1dfb8 *R/prior_dist_hmm.R
6e14ef648c5cf6db44a47768e01074ff *R/read_fitpoly.R
eba77afdccb8ea3198835b94bf04d52f *R/read_mappoly.R
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72b92de1b9c991dcb0741a0474e74993 *R/read_mappoly_vcf.R
e1a4da93d0bdb89e61408d7ccf056404 *R/reest_map_error.R
acc1bd848b07c28165e19211f78e70f9 *R/reestimate_map.R
6215a6737e639c2b394c0f332a02819a *R/rf_list_to_matrix.R
e3aa6b5a269ace5a10943e0f1cf0dfd8 *R/segreg_poly.R
6b66cdebce255af8c4aafc202910528d *R/sim_homologous.R
5b212f70cebde273959b01fcd1a9cf53 *R/simulation_utils.R
ae3d761401043aef9e262770da72e648 *R/single_map_hmm.R
654ef1731b243d10a72ac3528c033554 *R/split_and_rephase.R
6dacda2a2b7ce19d9c1e4c81e2e6dd73 *R/sysdata.rda
54f83b619cda1349de1e89af43c8aa10 *R/utils.R
aa86ca784121b3c34d851c6ca341efe4 *R/zzz.R
bfdeb5b606c1f6009e214cba5e93db44 *README.md
ea124a494ad7922985532ad3b308e4d5 *build/partial.rdb
cffd0bd632f089be3155aac9c7aa863f *build/vignette.rds
d6d36b9a3d5ccf1217a6b6b0f0a9513e *data/datalist
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af13bbf32f082454785efce1918e941c *inst/CITATION
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3402dcd98a9aafe2e076ed6d582e877e *src/est_map_hmm_given_prior.h
55aca96659c7813ddae0ed34bf878515 *src/genotypic_counts.cpp
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