afd4abe8a1a76dc51d056a11f73a9064 *DESCRIPTION
385e74f20f2cefee6c4d5da29202afd7 *NAMESPACE
0d048d493175b0571ff7619bfc522c79 *R/Betadist.R
447b4aedf37564abf35efbc70a006a0d *R/R6Model.R
d806e77875955b43ad696e5e651eb531 *R/R6covariance.R
550643aeb629ea86c26e04db16c0d176 *R/R6meanfunction.R
327208f93f09915cb6ef7c03984f29de *R/RcppExports.R
68d33b097ed08155fbcef3ef19ddacb9 *R/extrafunctions.R
5e389abde8df9ddbd031e9ebd1606ec7 *R/nelder.R
34bdeb38dacc0bf8b3528f92404a304f *R/printfunctions.R
15f07aaeec088f94efb77f6c437da7f2 *R/stanmodels.R
b30443dd6d6215185d8ac40af68840a8 *build/partial.rdb
7e297a31e37e77c201a2bacff2f979eb *configure
845efca43973cdde1a6174faf1d88e99 *configure.win
945b55cf2fc141dfeac022049ea21628 *data/yexample312a.rda
010ab54b438a90131ee1711c97f4d601 *data/yexample312b.rda
29320128771c3b5ecc520b13f13729e9 *data/yexample312c.rda
83e69ebd9bc8d119b584e5e6470a62ec *data/ytest1.rda
eb162d68e3628da70017a7dca3601cfc *inst/cmdstan/mcml_bernoulli.stan
9c071c5c22cfa7486320e7414abb6cd4 *inst/cmdstan/mcml_beta.stan
59bbab1c5bbe5b8d49119c6e6cbb6dc4 *inst/cmdstan/mcml_binomial.stan
0e6224c8dcd06bda02eaf0722690ef4c *inst/cmdstan/mcml_gamma.stan
7be74349b983769d99bb1ac8003bfb2d *inst/cmdstan/mcml_gaussian.stan
127129986da26c56a50dea0846410ea6 *inst/cmdstan/mcml_poisson.stan
445341c7c08698b1a03b030b6278fef5 *inst/include/glmmr.h
6d185e0ce53f09427909a5c372817cd1 *inst/include/glmmr/algo.h
d2d639eaa8d3df8fbef9f758517838c7 *inst/include/glmmr/calculator.hpp
27050149e4821abe8115eb73fe130e10 *inst/include/glmmr/covariance.hpp
226676d6c8bc893330f44ff14b153813 *inst/include/glmmr/family.hpp
59be3867c1a574aeaeb394bfbe1c77c1 *inst/include/glmmr/formula.hpp
89c3cceee4ba57c99ef0adf03caf2573 *inst/include/glmmr/formulaparse.h
d5405fc557eab60994973ab985b6da81 *inst/include/glmmr/general.h
43d4208972ce91ac7fd58b8026311769 *inst/include/glmmr/griddata.hpp
890c8e3257ce28b0d63c47df9a1a8294 *inst/include/glmmr/hsgpcovariance.hpp
d04e8c12a7cdefd707c9547eba08d170 *inst/include/glmmr/instructions.h
9c37716ba92d7a1a06b5cc75aa10a0a7 *inst/include/glmmr/interpreter.h
7f41bd79432d59c5948947b702239cc8 *inst/include/glmmr/linearpredictor.hpp
696b89feeaf6c9821d9ce0d5fed5b576 *inst/include/glmmr/maths.h
81b7c6f037ac8a60c54fde671b9080c1 *inst/include/glmmr/matrixfield.h
280445e04cdd86b75f95ebfc55716afa *inst/include/glmmr/matrixw.hpp
7d89e044a604e6247342306d35011491 *inst/include/glmmr/model.hpp
9627c6fae69411e9dfea542f343985ae *inst/include/glmmr/modelbits.hpp
2419fbdab2c76249aae80e362dbb3733 *inst/include/glmmr/modelextradata.hpp
ec54239bf0ad7131898a91757e46500c *inst/include/glmmr/modelmatrix.hpp
b3b2bb4ab56e06a80a3f56e1eeb0afc2 *inst/include/glmmr/modelmcmc.hpp
84f082d3b38ff6ef1c18b91f6e9e6db8 *inst/include/glmmr/modeloptim.hpp
7947cc9e77184a891cd842132f386f6a *inst/include/glmmr/nngpcovariance.hpp
9feb22830ca93fb5df92d6b68c76be51 *inst/include/glmmr/openmpheader.h
c8a37ebeb4443b6316dbe0a08d689875 *inst/include/glmmr/optim/bobyqa_algo.h
7f2cba9529cd0f24a012ee77a7fb1e88 *inst/include/glmmr/optim/bobyqa_general.h
1d423c5229a9e5f79013bb25a662788f *inst/include/glmmr/optim/lbfgs.h
654a285e3fa48bf30968542e13f88266 *inst/include/glmmr/optim/lbfgs/BFGSMat.h
c7e3d7c0ae3cf539560902a0bba47fe9 *inst/include/glmmr/optim/lbfgs/BKLDLT.h
7bc542ebae65f198cc31696e1ee112ed *inst/include/glmmr/optim/lbfgs/Cauchy.h
b998f47218cea0cfa5b600c8affa6081 *inst/include/glmmr/optim/lbfgs/LineSearchBacktracking.h
5e11d707754dc06054349246d4965c21 *inst/include/glmmr/optim/lbfgs/LineSearchBracketing.h
a03b27fae4bfb3bdc6c108283f9fa7ab *inst/include/glmmr/optim/lbfgs/LineSearchMoreThuente.h
35488847d79a40d60d040d9ef6cead29 *inst/include/glmmr/optim/lbfgs/LineSearchNocedalWright.h
d00c7cf76a0838299c9da38395716fe5 *inst/include/glmmr/optim/lbfgs/Param.h
b34ff8806dfc88aaae0c37d9a181772b *inst/include/glmmr/optim/lbfgs/SubspaceMin.h
e10a533cbe83b9cced55a35a375258c9 *inst/include/glmmr/optim/lbfgsb.h
026bd5552ed5ef84ee91462b22be98b5 *inst/include/glmmr/optim/newuoa.h
0860c81c1c183e2914f47a2fadf10a01 *inst/include/glmmr/optim/newuoa_impl.h
61dd17feac30229df56dd921445be694 *inst/include/glmmr/optim/optim.h
ec31de28d96e4dac0c243d5368a2d1c3 *inst/include/glmmr/randomeffects.hpp
75d70b5f8222dcf1ed64c318035f4c4b *inst/include/glmmr/sparse.h
855c064dbf8deaff96c8dc8a87169109 *inst/include/stan_meta_header.hpp
2ac02033af196352a7b7d7a8681a74d6 *inst/stan/include/license.stan
4fc8b7cc11e536ff4b1ac2e284a87ccf *inst/stan/mcml_bernoulli.stan
407dff0b0ffd04edf4ef9f6898353e4c *inst/stan/mcml_beta.stan
fbe20c94ae59c5e388ea62447ed98b35 *inst/stan/mcml_binomial.stan
7e1e0e9c3ba421fad3e472744168ff12 *inst/stan/mcml_gamma.stan
53f1a65df4a50351e7d81ecc2c99d687 *inst/stan/mcml_gaussian.stan
5d1e164a2c698ebd361c209aa3bc7ab5 *inst/stan/mcml_poisson.stan
d55fb4caabaf6a8b27d276c6156ec462 *man/Beta.Rd
12db242328b2b1ba15e8f580b1ad4d32 *man/Covariance.Rd
5d778b8a82755f8c17e83864e2f1fe8f *man/MeanFunction.Rd
0bbd0c4f9e761658018cc4e8729fafc0 *man/Model.Rd
f74c93fcdf563612cc166ee8863dadec *man/coef.mcml.Rd
f1484366d67230f928b25ec32316f332 *man/cross_df.Rd
eaaebc7d1b25327b100227d81bf40562 *man/cycles.Rd
f5a3bdafb36ab8b59240fb8b3e766e52 *man/fixed.effects.Rd
862acdedcd356b5e1dc1b45e906048d7 *man/glmmrBase-package.Rd
6b706c12885feace12a1f299db91498a *man/logLik.mcml.Rd
6faba21bb214f21048655975a3e3f561 *man/match_rows.Rd
ddc38be4ca68bd6cf18c2988f4916805 *man/mcnr_family.Rd
a778e627b8f69d614ae3fea10a933c68 *man/nelder.Rd
fa4335692e3032c30fd114dcbbae2ee6 *man/nest_df.Rd
007887a487e468ed4795b88b812c3cb4 *man/print.mcml.Rd
12ce82bc289ce88556f3d1f6fe64f5fe *man/progress_bar.Rd
60124794c4276ab0767153235bf6efb9 *man/random.effects.Rd
eadfb8c68018ba3c7520093a93952b8a *man/setParallel.Rd
6c7821cb72efde8f071ee7479a9e12f8 *man/summary.mcml.Rd
88df7a0688f61dada014f10a5288e6bd *man/yexample312a.Rd
c352628317bc8d5e06446bcf9f5cc8df *man/yexample312b.Rd
02321e666cf723c7c9f2d2a3b610493d *man/yexample312c.Rd
030d412b97d10070bfa14d5dbc3e22b3 *man/ytest1.Rd
6bb2f868a77f70690f7dbdedc838cee1 *src/Makevars
104ad5a55f5f0ba86d63cdbc1b7b1146 *src/Makevars.win
efca31093b37e3a3b26d87711a2527eb *src/RcppExports.cpp
4ec45665a18d09b22e65b61251c01626 *src/covariance_module.cpp
0775440f2c5d07f7e5180a8aee810b46 *src/linpred_module.cpp
723c05871d8560e244e18c00432d4f9a *src/model_module.cpp
79c171d2a56d3284bf60058b42b80260 *src/model_module_2.cpp
5bef781ad0b47f8ce398a3d201452fc8 *src/model_module_extension.cpp
417aa01314374adade721c249ba53828 *src/openmp_utils.cpp
1c78a0798b517dd50d0bed77ebc88a2c *src/other_functions.cpp
0825b214dcb9e4ada1be983d03185a0a *src/stanExports_mcml_bernoulli.cc
8d7937e5375c648bbf6af43882504b8d *src/stanExports_mcml_bernoulli.h
7604d1dc8c797bf01c3c377b3daab236 *src/stanExports_mcml_beta.cc
f14c65f8f73c8ff990724582af62089e *src/stanExports_mcml_beta.h
23a0b8e1036c82a4153d55258e0aefb4 *src/stanExports_mcml_binomial.cc
350f155f2cacac6558bbbfe2d626a899 *src/stanExports_mcml_binomial.h
0039ed67a741d8a7ad2b9eaeb3a6ff3a *src/stanExports_mcml_gamma.cc
c25d38d249cd2dfbc6f4a397bd0be6bc *src/stanExports_mcml_gamma.h
9add215703495e8b2d2a491b661aaf33 *src/stanExports_mcml_gaussian.cc
ce33b7081015d2327017f588bc269da5 *src/stanExports_mcml_gaussian.h
b593653b07e37a5d2cb2f8e3d36e8f9b *src/stanExports_mcml_poisson.cc
d0afcf183c4236baf30c6893d1588749 *src/stanExports_mcml_poisson.h
