Package: fbar
Type: Package
Title: An Extensible Approach to Flux Balance Analysis
Version: 0.1.23
Date: 2017-1-14
Authors@R: person("Max", "Conway", email = "conway.max1@gmail.com",
                  role = c("aut", "cre"))
Description: This is a simple package for Flux Balance Analysis and related
    metabolic modelling techniques. Functions are provided for: parsing
    models in tabular format, converting parsed metabolic models to input
    formats for common linear programming solvers, and
    evaluating and applying gene-protein-reaction mappings. In addition, there
    are wrappers to parse a model, select a solver, find the metabolic fluxes,
    and return the results applied to the original model. Compared to other
    packages in this field, this package puts a much heavier focus on
    providing reusable components that can be used in the design of new
    implementation of new techniques, in particular those that involve large
    parameter sweeps.
License: GPL-3
Depends: R (>= 3.0.0)
Imports: assertthat, Matrix, dplyr, tidyr, purrr, tibble, stringr,
        magrittr, ROI
Suggests: knitr, rmarkdown, testthat, tidyverse, Rglpk,
        ROI.plugin.ecos, ROI.plugin.glpk
VignetteBuilder: knitr
RoxygenNote: 5.0.1
NeedsCompilation: no
Packaged: 2017-01-14 01:54:33 UTC; max
Author: Max Conway [aut, cre]
Maintainer: Max Conway <conway.max1@gmail.com>
Repository: CRAN
Date/Publication: 2017-01-14 12:46:35
