20fdb86e63f857cb03ed383f0330d7aa *DESCRIPTION
6b015efa71a986f92c5b1ef048ff6436 *NAMESPACE
fa26a57bcdc78df255e71efc9de265cd *NEWS.md
4c5fde213ec983985d117c4788ca5b19 *R/MAX3.R
fdf073e54217cfa42817ce474102d87a *R/PRS.R
59e1e8f2845af8db60814e5580da51fc *R/RcppExports.R
2c298df10aaf12ee3192d11c85827d15 *R/apply-parallelize.R
a0fb05e493cd5ef202ff2bbec9a12db8 *R/autoSVD.R
1eca33be1821333690d425b7defe1370 *R/bigSNP-class.R
b21181ebb9ab66f5004431f6658653c9 *R/bigsnpr.R
e5368616004b71698d26eab9dd14bd9d *R/binom-scaling.R
3adbe75adbaf273acb8300903bc3be65 *R/corr.R
d2543dec2ce0c6065b84cd618f775532 *R/external-software.R
e29f727f1de038fe65d6a812fea1ab8e *R/fake.R
31f9e6008c2f9e388f8fa4939cc9039b *R/get-save-infos.R
6ffb8e4d58856ebacf29d2ba7808b26b *R/impute.R
21ee8b80bd64908c02e06724943154b4 *R/man-qq-gc.R
010312433e99ea7e824e93284a5e73f2 *R/pcadapt.R
c11f3828513bb292dbb2db493702b7e7 *R/pruning.R
d40f463d5cb167a73f30da610ce01569 *R/readplink.R
0ec00bad176a400241a01ab1da9c7301 *R/subset-QC.R
686b08294c2916d1e74f50cce2c8fa42 *R/utils-assert.R
19b5be69d98be3c0a848e7617c761d8d *R/utils.R
cc70d64bcc8271168460a8b7346354a5 *R/writeplink.R
c77807ed62573bcf4d768fdace2c2850 *R/zzz.R
8058fbb039c18c2281ef9595e65eabae *README.md
b6a17477d45da8d606bd64c09c0b2932 *data/LD.wiki34.rda
e3151d90e1d37b75742eef22487ad1c1 *inst/CITATION
a2e8cfe3164c08b8cc01db75d488e073 *inst/WORDLIST
35cf424fedbfcf6321c67096ae900395 *inst/extdata/cluster1
3ca5ee8fdd81b5412ea5a0154fabbf78 *inst/extdata/cluster2
23ac360a55528d979141b12a1d8b0a9c *inst/extdata/cluster3
7960ea9d91206f4943b62064d8e3cd99 *inst/extdata/example.bed
4225295fcc331e1a2c0d502e11fc97e8 *inst/extdata/example.bim
757d2c95a252dbb34941e77cacdefeb4 *inst/extdata/example.fam
3a9fb2906a074338f6b40d185dd4cb43 *inst/testdata/clumping.rds
4c6c11e8c6b09433c1498d6ac58d3668 *inst/testdata/example.ld
05f3fc22fb16d72419e671b0b54e6c51 *inst/testdata/pruning_ct.prune.in
7cf26d21194bc6b08242822e6ddea942 *inst/testdata/pruning_kb.prune.in
2da201de303fc52ed72a9540c9baf68a *inst/testdata/pval.rds
9e029cb629e96ec9f36dd127b45eb110 *inst/testdata/scores-PRS.rds
ad01b7f56f05895f01c6c4ca59902a1f *man/LD.wiki34.Rd
42d2188ca24221028c08dbe41a6d1e27 *man/bigSNP-class.Rd
f1c616d740dd4bf82909a502828f8c41 *man/bigsnpr-package.Rd
6100fb6f6e043e7485947a2df84f06a9 *man/download_beagle.Rd
858ab920fb34e414e6ecb9fc1df04241 *man/download_plink.Rd
dd2dc9bf16bff4903e54c747c68d4d52 *man/pruning-clumping.Rd
ab548fe541b2f6132a7eb2c01d645672 *man/same_ref.Rd
c474b235e327e37c5ab3abfbf0cef4c1 *man/snp_MAF.Rd
83580fa70307c46fc4af8f3c2991516a *man/snp_MAX3.Rd
89b059f0ae2cf288fa6ec9825986a770 *man/snp_PRS.Rd
b74c95a78f59171f8233e3e6c05d2e2a *man/snp_attach.Rd
e576bc3e8fecc5ed4e5edf5178c8447a *man/snp_attachExtdata.Rd
4d6a6f7f1f891c7d6d173bf04225033c *man/snp_autoSVD.Rd
39fffbaaf8f7be230fb98cbe9fd9ba0c *man/snp_beagleImpute.Rd
ed8f4f5e00d8ece298994064655a18e5 *man/snp_cor.Rd
337cb8e7afc7cd8aea72ad4f34175a8a *man/snp_fake.Rd
8b3944443501ef91acac626966f78312 *man/snp_fastImpute.Rd
83e2f4d5b49504a8777f6219b033cdc5 *man/snp_gc.Rd
028291ad29c2837e3ecc515a67920b30 *man/snp_getSampleInfos.Rd
40063c3e3d4612894409eff1ce28dc06 *man/snp_manhattan.Rd
b126c55a106a4873268f1b09e1f7ab24 *man/snp_pcadapt.Rd
1d9af086ab2375c9dd96cfb97a6af034 *man/snp_plinkIBDQC.Rd
c5e118d8932a71ad787d90355386b7cb *man/snp_plinkQC.Rd
31f5efc1119fbdd809bccf20a0b0cb3b *man/snp_plinkRmSamples.Rd
fb68424903fc527e04d606d33cbbbb0e *man/snp_qq.Rd
50cc0463eb484126cedb4a1a37f85d00 *man/snp_readBed.Rd
2cf0037d23ed1f4406ce89616c314e22 *man/snp_save.Rd
f25632ecd0d5226ba27b87f7906c00d2 *man/snp_scaleBinom.Rd
86d351c23691b94b2e945561da9bc06b *man/snp_split.Rd
04b219c6ac8832c89071c1df59735510 *man/snp_writeBed.Rd
86967edd322db867a5fbfbddb4384795 *man/subset.bigSNP.Rd
3e42fe43541cf937e1f4ba495fc7a4a3 *src/Makevars
3e42fe43541cf937e1f4ba495fc7a4a3 *src/Makevars.win
29d3abbc7660cf5f627df3bf456f0795 *src/RcppExports.cpp
ef485b64da49a15b9f2e2b1dc16cff26 *src/copy-subset.cpp
cacc1d2000d31425cdd2a2b6d5a10076 *src/corr.cpp
49b3a69a8351a88b5b3fa8db7b340fb6 *src/pcadapt.cpp
a0787ec5bb2bee4baf69e3eaaad37678 *src/pruning.cpp
9970028f4bd2283e131398678380e85c *src/readplink.cpp
41da65345c5b3b5e13dae2f528eb407f *src/rollmean.cpp
bc882e5235bfdccc9e49f99290365b40 *tests/spelling.R
bb369f8cb81b52a9a6831ed20187d9a2 *tests/testthat.R
87ba85d45dd75ea7cfae29b5854da7c9 *tests/testthat/test-MAX3.R
5ed12ceffc2319f78dbabcf1275b7087 *tests/testthat/test-PRS.R
109db01ab5abd9ef480e6c1b1678476f *tests/testthat/test-attach.R
f4b7bdfd985bf475a03dd3ec9768f3c9 *tests/testthat/test-corr.R
925b40aa6781182391d4360b92b372ab *tests/testthat/test-fake.R
8c7620472eeb2be97a4a899cc007882e *tests/testthat/test-fastImpute.R
937cad884a64863c7cbecfd2450504ea *tests/testthat/test-get-save-infos.R
a0134c670719da6397c63b84ff38c7e0 *tests/testthat/test-parallel.R
21e6c3b6534fc379ad13c9824bbc6f42 *tests/testthat/test-pcadapt.R
445f56577b48973e2dfe605f4f0d57ea *tests/testthat/test-plink-QC.R
f5b5cd0ca1f0ba3a9b62d0ffd76efb00 *tests/testthat/test-pruning.R
88cfc31bea2f026ae45620ff1901576b *tests/testthat/test-readBed.R
c714e9a5bee38ec0a654a8b1c539004e *tests/testthat/test-subset.R
75fc7b23f78972018b585fda2765334a *tests/testthat/test-writeBed.R
