a95475cd7781074a97907e1b013d3f2f *DESCRIPTION
12b0096a9922af409bf2d95affb9010b *NAMESPACE
cf8c66c4d864c6806017b1c7e1a11dd1 *R/compare.all.trees.R
c6fa7271e95244e150ddfeb76a601328 *R/consensus.pyRAD.R
0fb5b558a380df98ba3feeff3162a810 *R/filter.by.R
9da6360a47ce2504d80d59463b80342a *R/gen.RAD.loci.datasets.R
c84e1550098a7eed9fc994e7325b1e72 *R/genTrees.R
68241b08335ff022a8a014e7d962f34d *R/genotypes.pyRAD.loci.R
137f88be46c9bc2aacf740d4ecf12386 *R/get.raxml.siteLikelihoods.R
0da85e0d0a23ca88772f3793c1453caf *R/get.raxml.treeLikelihoods.R
0f7d0fb29e86a8c0c9826fb5ea821388 *R/grab.pyRAD.locus.R
4f2f1f5336e6691ebe3e7b9ffdf6a3b5 *R/group.subset.pyRAD.loci.R
24e81a28a1c352e6f1b74516108c6c23 *R/lengths.report.R
4619727d602de2ed60c038ecb2d5da45 *R/locus.dist.R
b3774d40a649b5a6bb07c4d879205f34 *R/match.lnL.to.trees.R
76b27904997be37ea90ba8f61b25bdb7 *R/overlap.report.R
9b3dc1551991650693023808f1c22404 *R/pairwise.fst.R
cb2caa965debc5f6997ac21a3329fd96 *R/plot.locus.dist.R
691ab700a1dd584d84ff8c8d0c8fee13 *R/plot.partitionedRAD.R
6db01f5855343e35f91641373b47c316 *R/plot.rankedPartitionedRAD.R
56618c88c5d03bbef9f90567e3fcc9dd *R/print.pyRAD.loci.R
70cd56c06864b86d06e978fa440bdb18 *R/rad2mat.R
46f6c1381f62dcdc39b6c4aa3b4b2803 *R/rad2phy.R
3738c2473526cccc21f17c3f2e1707c1 *R/rank.partitionedRAD.R
a86b21118ffd13808e2dfca6a3a734be *R/read.pyRAD.R
021dfa62ff64033325537bc231796168 *R/rtreePhylo.R
dc97e694b95662ba8a89bc843627306a *R/subset.pyRAD.loci.R
5589f7e33b4722f79705c76206c10909 *R/summary.pyRAD.loci.R
a46155d9649ad7672428dab9e7bc6524 *R/tidyName.R
3fd5a357b6935c9fc6bba4a787c8cad1 *R/unique.multiPhylo.R
1de8ba3b5bf151fef63bedd9fdf2765c *R/write.DNAStringSet.R
c99121d7643aecbab7bc44c1e9e315f7 *data/oak.rads.rda
ccfe8097ce6c2162b93bce5a640ff854 *data/oak.tree.rda
bee7f4c6d13fe4ed9457bb6261d146ee *inst/VERSIONS
6dc731ffb4da41f2de0c8c19b28fbdf2 *man/RADami-package.Rd
6f839e40f9b1a0667fe23bc587c36d70 *man/compare.all.trees.Rd
504e81c71b13730aec03d1444e0f481b *man/consensus.pyRAD.Rd
772f3210f1275a975a53f388c4c26d82 *man/filter.by.Rd
dfdb8e520baf6b382861c0048936d349 *man/gen.RAD.loci.datasets.Rd
84a321590162115ef30ccb402c7962a0 *man/genTrees.Rd
e232ae8a3aaa6d4de19d6aa1e2a1665a *man/genotypes.pyRAD.loci.Rd
75b0a3faf97439ffd036682e9961fd2c *man/get.raxml.siteLikelihoods.Rd
8101b755e349b564b0fa8777e42843c5 *man/get.raxml.treeLikelihoods.Rd
e3eb39b6f7a601ef26dd7d61ea12bd85 *man/grab.pyRAD.locus.Rd
ddd40eb5f2e67213d175b48df2b48f9d *man/lengths.report.Rd
aa0d3ba455192d96362302cfbd5f68d7 *man/locus.dist.Rd
6523a46aa41642a244fc0c774e582a62 *man/match.lnL.to.trees.Rd
3c58692d2f862949188e624d943c4772 *man/oak.rads.Rd
6840989ac6c462f736c410f71bdc7f6a *man/oak.tree.Rd
3d73848ddf011a6cd028d5dd11009680 *man/overlap.report.Rd
2d82176e0296700831fe3401127c8327 *man/pairwise.fst.Rd
dec4520d8cb6b11b3c8cb3c71bac3438 *man/plot.locus.dist.Rd
861673fad2b563faec035d14ef6336df *man/plot.partitionedRAD.Rd
e5187ef74ac44554a2c6ee9e84f731ee *man/plot.rankedPartitionedRAD.Rd
43973074e2eb4bfa120d452599fa4012 *man/print.pyRAD.loci.Rd
d6f33f4155f488c7b08986199cd20cbc *man/rad2mat.Rd
a78e6c676d64d4d8d9b9778846804c20 *man/rad2phy.Rd
6b017c5cae821beb6343922a4ff33e23 *man/rank.partitionedRAD.Rd
22d2a765bde9a5c12116d24addec8f5a *man/read.pyRAD.Rd
8a937f46bd5ca0e5111406c2ba7289ed *man/rtreePhylo.Rd
e8fb86a8edf7e768d945ca24ff7b1f2b *man/subset.pyRAD.loci.Rd
926e560368201d004a3b56957a216c91 *man/summary.pyRAD.loci.Rd
3681c306b4af9398272a5340c4ece53c *man/tidyName.Rd
ebaa05302b7aaa9d0f050682b1210a3f *man/write.DNAStringSet.Rd
