f4226b7c98a9d20516e0462046127e9f *DESCRIPTION
e1c5f9a2c624872acf54bfaf47345aa8 *NAMESPACE
4076c6fa4d32e0ef706fe23c316387ba *R/benchmarkIncidencePrevalence.R
52d71ae73d047eb9ad4a34c7412ec92e *R/bindEstimates.R
17e67f080e651fae16d9369cedaa3b78 *R/estimateIncidence.R
eeb7a4872a956c9f376d7bdc2be824f4 *R/estimatePrevalence.R
a356796a3ff07de310ab53b1e6f038b7 *R/exportIncidencePrevalenceResults.R
568a09a225a87fd41efcf25d0e0dce5c *R/generateDenominatorCohortSet.R
43c16924d536894a4e57324dd294c1e8 *R/getDenominatorCohorts.R
71db8045bdf3485764b646dc72fe5219 *R/getIncidence.R
5a72e1a43b82aaefaa49ab6510b92abe *R/getPrevalence.R
21a9f702eb3955d3f97e6c4866a2b06b *R/getStudyDays.R
e9536d8dc707669f2de1af958065a0f2 *R/incidencePrevalence-package.R
62528b056df6aa5abd634e08f55dc9b1 *R/inputValidation.R
a78c750b6726cedf26f5c75f3ba2e2a8 *R/mockIncidencePrevalenceRef.R
60f2ba92532e560e29f7fdf3706c31f3 *R/obscureCounts.R
cc5e603e011699e09c8fb7866b6b14c7 *R/plotting.R
1311f2b792b1384edf8f34cfff8d5f0e *R/recordAttrition.R
cf794928715019cf81bd51d467156178 *R/utils-pipe.R
0953f7a59fe12be7aea0db45c701cc06 *R/utils.R
ee0da2e91854362811dc0cc0a221af79 *README.md
dea1a9192640e9513ba38f3b7a1fb63f *build/vignette.rds
916a1f6dd6ca9007ad98d7e0cc08f5d2 *inst/WORDLIST
9f12879226b7b4d8d33b6bf1b16ec130 *inst/doc/a01_Introduction_to_IncidencePrevalence.R
470dcd129937353117b9cd086b8894b0 *inst/doc/a01_Introduction_to_IncidencePrevalence.Rmd
104ce4659e466f6202fc9af478901047 *inst/doc/a01_Introduction_to_IncidencePrevalence.html
a81e3f8a59c3cbf8ef41de85a1dc56ca *inst/doc/a02_Creating_denominator_populations.R
8cfe2cb7d1fa5046253ed94bd1f70a1c *inst/doc/a02_Creating_denominator_populations.Rmd
39ddfee1584cd0d3f4687edc320850a0 *inst/doc/a02_Creating_denominator_populations.html
fbc3a6f7d10415d31a5a9a1da39d0638 *inst/doc/a03_Creating_target_denominator_populations.R
4738a5781baf85bec752c2a14286fb2e *inst/doc/a03_Creating_target_denominator_populations.Rmd
f8282038ec1754218ff27a32f746b02e *inst/doc/a03_Creating_target_denominator_populations.html
a51f915342676c69d09a545cad7af700 *inst/doc/a04_Calculating_prevalence.R
2020dbfd774b481783a5a05d0614a378 *inst/doc/a04_Calculating_prevalence.Rmd
07c76e684465eea3ef977a159d41d696 *inst/doc/a04_Calculating_prevalence.html
3457edd070a70f708adb13b5dc584fbf *inst/doc/a05_Calculating_incidence.R
93c2153477c0ed2378c30157babea4b3 *inst/doc/a05_Calculating_incidence.Rmd
0211734768587c3131fc85ede1b3e40f *inst/doc/a05_Calculating_incidence.html
1efc5f34b9621befdc8f457cc1940456 *man/IncidencePrevalence-package.Rd
b87edfc565a0719ce21ba27de37ca376 *man/benchmarkIncidencePrevalence.Rd
00037a23fe62115055085d09be836bd2 *man/bindIncidenceEstimates.Rd
05a3b23a90dfd1e14423cc7f9504c4a2 *man/bindPrevalenceEstimates.Rd
a18196a5f81991b50489319bbfd16f80 *man/estimateIncidence.Rd
5e5f4119367494d3faaf200d7c649c61 *man/estimatePeriodPrevalence.Rd
fa324cc74d35e917b56731e45cd9666b *man/estimatePointPrevalence.Rd
4a30f775270299664c340cafa48305ef *man/exportIncidencePrevalenceResults.Rd
a126703e25bbcd21b7664138934e71ac *man/figures/README-unnamed-chunk-11-1.png
340751dee215a67d4fadb329e925ae8b *man/figures/README-unnamed-chunk-12-1.png
616a4167536eed9100727a9829ec7036 *man/figures/README-unnamed-chunk-13-1.png
48a573a5113ac4a5b75c2a4031594ed4 *man/figures/hexsticker.png
ee492c0cc315d1df2b375a82b0ada9be *man/generateDenominatorCohortSet.Rd
fb54b1b30251c9f11154c8cca2eaf83e *man/generateTargetDenominatorCohortSet.Rd
885a1223f6871b567bb0f9ecacb32b65 *man/incidenceAttrition.Rd
f3ce0f6d92106add0caadfde1c1afed3 *man/incidenceSet.Rd
d9502a8b495f40f48d2dafe30db725a5 *man/mockIncidencePrevalenceRef.Rd
76d90157812a4aff34cf8680f4aab27d *man/participants.Rd
29ee7383caa7fc8c14f52bd035509064 *man/pipe.Rd
cf1a8140a93449ab5077fa90edb964b7 *man/plotIncidence.Rd
ae5cb4afa58fd05490aa32f6680a9c00 *man/plotPrevalence.Rd
6a42b1f767dcbbe141fd7610faa22f4e *man/prevalenceAttrition.Rd
c9e713bce4c0b3a19f7de00493e49dab *man/prevalenceSet.Rd
2f7c1ff89abe262eea81c390c5b432ae *tests/manual/README.md
0d4f120dc3fc5511ba0028544d7902aa *tests/manual/test-dbms.R
bbf8021c6bb4aa08db4b90db7be2eee5 *tests/manual/test-eunomia.R
80372f53de4373ac2d61434b9f3822be *tests/testthat.R
5cf5a1c2cc5c58d1ccddd0495d740a88 *tests/testthat/test-benchmarkIncidencePrevalence.R
62e323b2ccfeac679fce944bc20314bb *tests/testthat/test-bindEstimates.R
34d4f3843183a7e6436f9b80645600a7 *tests/testthat/test-estimateIncidence.R
09e38861b14567c521d8863af8ea1a89 *tests/testthat/test-estimatePrevalence.R
ff0342ca7239b4a748446b2fcb719ff4 *tests/testthat/test-exportIncidencePrevalenceResults.R
288bdff165e899b4dedfc0b8b6b487ab *tests/testthat/test-generateDenominatorCohortSet.R
f50c5bbc29ce245e63e465644fb65bdf *tests/testthat/test-getStudyDays.R
eea39580cc23ddbe355ffb247b2b3731 *tests/testthat/test-mockIncidencePrevalenceRef.R
f38d5fb7468426f13d6aadf44bfecc90 *tests/testthat/test-obscureCounts.R
fad1fc3d9fd2194c26219ebb39184112 *tests/testthat/test-plotting.R
15f216478f252cf27fb372ffc85d858f *tests/testthat/test_should_fail/mock_result_1_2024_02_04.csv
61028735b6f3b637484b4a4ca75f38b5 *tests/testthat/test_should_fail/test_database_result_1_2023_10_04.csv
5c47bc3531c7e9da0c8f39acc001eade *tests/testthat/test_should_fail/test_database_result_1_2023_10_17.csv
64fae7f06df5ec1e48683cde6077917a *tests/testthat/test_should_fail/test_database_result_1_2023_12_08.csv
470dcd129937353117b9cd086b8894b0 *vignettes/a01_Introduction_to_IncidencePrevalence.Rmd
8cfe2cb7d1fa5046253ed94bd1f70a1c *vignettes/a02_Creating_denominator_populations.Rmd
4738a5781baf85bec752c2a14286fb2e *vignettes/a03_Creating_target_denominator_populations.Rmd
2020dbfd774b481783a5a05d0614a378 *vignettes/a04_Calculating_prevalence.Rmd
93c2153477c0ed2378c30157babea4b3 *vignettes/a05_Calculating_incidence.Rmd
cdae2641683aded95cec6dad94841a6e *vignettes/denominator_pop_inclusion_fig1.png
6f8a8e6e770268ba412a398f7d2e118c *vignettes/denominator_pop_inclusion_fig2.png
00795028114b0238ae6998e51bf084d7 *vignettes/denominator_pop_inclusion_fig3.png
012fa3b32f988f280bc6802496b39a3b *vignettes/dpop1.png
30f1fab5decb81c3d47481e9de1f55b3 *vignettes/dpop2.png
f905c6b05ad4ec1e511d972986e92e05 *vignettes/dpop3.png
130b79294f59e7ca03e6bc91dc8e78cf *vignettes/dpop4.png
bd75bc03a34508656583cf073c17de02 *vignettes/inc_no_rep_no_washout.png
2a4e213fe56e0fb66bf2533e0d6457ad *vignettes/inc_no_rep_some_washout.png
6c7877619553646b18857d85e7714852 *vignettes/inc_no_rep_washout_all.png
72c0b255131e7bc6c5292ea1e66bfaeb *vignettes/inc_rep_some_washout.png
c3ecb2014b92d9353d01119f6203b5d2 *vignettes/mock_db_fig1.png
18c6ac379e28ea9ff18a25014fe8ed5e *vignettes/mock_db_fig2.png
80994edc140d40662fe44ca3c54162a3 *vignettes/mock_db_fig3.png
38ac974e5a58d33e44cd0359772777a0 *vignettes/numerator_pop_fig1.png
91dfebce43f482f12b1e305ff6514a05 *vignettes/numerator_pop_fig2.png
12ed94210ae9a969b70a96732cb4aabb *vignettes/numerator_pop_fig3.png
40f22b3509fcfbfaac7f119ddd7bf164 *vignettes/period_prev.png
b5ca590df13f2a24e321bfa48a275655 *vignettes/point_prev.png
