d26dc9c3b9692b662f6f1eebcb74e01b *DESCRIPTION
bd284c59e3ecb61d4c4d8d20e5cf1b88 *NAMESPACE
f09ced835c46acadfa7bbcb60dcbd798 *R/benchmarkIncidencePrevalence.R
ab1c0bbc56fd677a42a33578a54b2e4a *R/bindEstimates.R
487422a44fb5574c2065e48daf3a3c95 *R/estimateIncidence.R
8a0f99a55be82f60c5a9f50b1558ff1b *R/estimatePrevalence.R
d7378ed6cc2dbcbf82f9a4bc0212a3f4 *R/exportIncidencePrevalenceResults.R
dcf32ab123e735fb505646caf6a99fd8 *R/generateDenominatorCohortSet.R
e5ae9df60849cde0ebfc7257229da382 *R/getDenominatorCohorts.R
c9ac40e60f3233656a7cb644513cdfa2 *R/getIncidence.R
9864fa544e2e523ce122511cd2b53068 *R/getPrevalence.R
c8686f9fc6ca1051d4f32143d4269313 *R/getStudyDays.R
e9536d8dc707669f2de1af958065a0f2 *R/incidencePrevalence-package.R
69f0146904d1cb60c58108ed3db5853f *R/inputValidation.R
1d0436ca9c81053d6a214e77baf848c3 *R/mockIncidencePrevalenceRef.R
10c3af5de717e4cef9754fc9a6811ae5 *R/obscureCounts.R
67383b646149599bc149298fdcca9a12 *R/plotting.R
78e4c9e6fb677a1f60d8e70bd5587393 *R/recordAttrition.R
cf794928715019cf81bd51d467156178 *R/utils-pipe.R
695e4cb25fc2a1270aa9b8741503dc78 *R/utils.R
716195db6618d2b89e5e49e9753af751 *README.md
51b852b8fab8fed5dcc6feb92e52a6dc *build/vignette.rds
227b706eccd20b194b10f22549e09395 *inst/WORDLIST
1c061bf9768e5348cc324768b944f4dc *inst/doc/a01_Introduction_to_IncidencePrevalence.R
e3c9083b86b6b67fe703da19977dd2f3 *inst/doc/a01_Introduction_to_IncidencePrevalence.Rmd
cb3472f68eec1fe63395c136212c1d68 *inst/doc/a01_Introduction_to_IncidencePrevalence.html
1c486e2f80265a59ea66d74c947f6d43 *inst/doc/a02_Creating_denominator_populations.R
252586c8a21f6a6cf1238a7d953f48f5 *inst/doc/a02_Creating_denominator_populations.Rmd
e16beb7b7e1d1ebb843e0ddf2896098d *inst/doc/a02_Creating_denominator_populations.html
99c8e2339e5f22b4a64069e610256562 *inst/doc/a03_Creating_outcome_cohorts.R
80ef05e9cde453c9ea51c94e223338fa *inst/doc/a03_Creating_outcome_cohorts.Rmd
4ce3f59193f8ab5f22abb55ddbc77a48 *inst/doc/a03_Creating_outcome_cohorts.html
d397f4f3421d116e21813ecc76f3ce40 *inst/doc/a04_Calculating_prevalence.R
6133292e3d70a234e573515c7998bb5c *inst/doc/a04_Calculating_prevalence.Rmd
2569135768af3a19338649cbca1fbe0c *inst/doc/a04_Calculating_prevalence.html
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eef4da3f5fa8e9fe1bc84412cac05c71 *inst/doc/a05_Calculating_incidence.html
1efc5f34b9621befdc8f457cc1940456 *man/IncidencePrevalence-package.Rd
253abf2ee95e220d227969449e1ba539 *man/benchmarkIncidencePrevalence.Rd
c535569673bdc616623cdf3da80537e3 *man/bindIncidenceEstimates.Rd
8305db6a17bba73723ff62a85e664cba *man/bindPrevalenceEstimates.Rd
a6f696c73e54e0497ee2848bc32e8238 *man/estimateIncidence.Rd
34b5c820f4458e9dbd3b0918c4532066 *man/estimatePeriodPrevalence.Rd
05ef89ef0e181cdd07c816915d04d2ea *man/estimatePointPrevalence.Rd
3e5bf29423cec87dcca0cae277eb2ec2 *man/exportIncidencePrevalenceResults.Rd
48a573a5113ac4a5b75c2a4031594ed4 *man/figures/hexsticker.png
d566102cc488a4073c4402441d6c02b1 *man/generateDenominatorCohortSet.Rd
885a1223f6871b567bb0f9ecacb32b65 *man/incidenceAttrition.Rd
f3ce0f6d92106add0caadfde1c1afed3 *man/incidenceSet.Rd
17024dc3543b3c865d9225c3d8e6b0eb *man/mockIncidencePrevalenceRef.Rd
76d90157812a4aff34cf8680f4aab27d *man/participants.Rd
29ee7383caa7fc8c14f52bd035509064 *man/pipe.Rd
7a5d771938f23e3e063db54a85cf98c4 *man/plotIncidence.Rd
9c06c5b13ca90293615a2227bb78d927 *man/plotPrevalence.Rd
6a42b1f767dcbbe141fd7610faa22f4e *man/prevalenceAttrition.Rd
c9e713bce4c0b3a19f7de00493e49dab *man/prevalenceSet.Rd
2f7c1ff89abe262eea81c390c5b432ae *tests/manual/README.md
06166b9caec72383ba925f3fbcb9e096 *tests/manual/test-dbms.R
dada3193a27a7fd9e704b3a413d023b3 *tests/manual/test-eunomia.R
80372f53de4373ac2d61434b9f3822be *tests/testthat.R
a1ff198dd05023140cb8593f26567e7b *tests/testthat/test-benchmarkIncidencePrevalence.R
7ab97efe865cf28a000687878955b1ed *tests/testthat/test-bindEstimates.R
2045c434fd1664bd0ed7d701b3cf710a *tests/testthat/test-estimateIncidence.R
c00a26721cf1a490858dfe58e5aef831 *tests/testthat/test-estimatePrevalence.R
2a333f626bd97975a81f295de402a6ed *tests/testthat/test-exportIncidencePrevalenceResults.R
724badfa7b204aaa9f5a42ff6b7e1add *tests/testthat/test-generateDenominatorCohortSet.R
f50c5bbc29ce245e63e465644fb65bdf *tests/testthat/test-getStudyDays.R
13d283cc49c32ad39658667bfc73ce80 *tests/testthat/test-mockIncidencePrevalenceRef.R
f38d5fb7468426f13d6aadf44bfecc90 *tests/testthat/test-obscureCounts.R
21fa121378174d49f23c7cc701790f9a *tests/testthat/test-plotting.R
e3c9083b86b6b67fe703da19977dd2f3 *vignettes/a01_Introduction_to_IncidencePrevalence.Rmd
252586c8a21f6a6cf1238a7d953f48f5 *vignettes/a02_Creating_denominator_populations.Rmd
80ef05e9cde453c9ea51c94e223338fa *vignettes/a03_Creating_outcome_cohorts.Rmd
6133292e3d70a234e573515c7998bb5c *vignettes/a04_Calculating_prevalence.Rmd
c77722122d8666112c6491c421740ebd *vignettes/a05_Calculating_incidence.Rmd
cdae2641683aded95cec6dad94841a6e *vignettes/denominator_pop_inclusion_fig1.png
6f8a8e6e770268ba412a398f7d2e118c *vignettes/denominator_pop_inclusion_fig2.png
00795028114b0238ae6998e51bf084d7 *vignettes/denominator_pop_inclusion_fig3.png
012fa3b32f988f280bc6802496b39a3b *vignettes/dpop1.png
30f1fab5decb81c3d47481e9de1f55b3 *vignettes/dpop2.png
f905c6b05ad4ec1e511d972986e92e05 *vignettes/dpop3.png
130b79294f59e7ca03e6bc91dc8e78cf *vignettes/dpop4.png
bd75bc03a34508656583cf073c17de02 *vignettes/inc_no_rep_no_washout.png
2a4e213fe56e0fb66bf2533e0d6457ad *vignettes/inc_no_rep_some_washout.png
6c7877619553646b18857d85e7714852 *vignettes/inc_no_rep_washout_all.png
72c0b255131e7bc6c5292ea1e66bfaeb *vignettes/inc_rep_some_washout.png
c3ecb2014b92d9353d01119f6203b5d2 *vignettes/mock_db_fig1.png
18c6ac379e28ea9ff18a25014fe8ed5e *vignettes/mock_db_fig2.png
80994edc140d40662fe44ca3c54162a3 *vignettes/mock_db_fig3.png
38ac974e5a58d33e44cd0359772777a0 *vignettes/numerator_pop_fig1.png
91dfebce43f482f12b1e305ff6514a05 *vignettes/numerator_pop_fig2.png
12ed94210ae9a969b70a96732cb4aabb *vignettes/numerator_pop_fig3.png
40f22b3509fcfbfaac7f119ddd7bf164 *vignettes/period_prev.png
b5ca590df13f2a24e321bfa48a275655 *vignettes/point_prev.png
