3c4c3d0ef21bba86f223583ac116a61f *DESCRIPTION
872e80e4ec0749dd4bf8d79d9fbfbc5e *NAMESPACE
d196f2e90e2b827e90a4d6c0734785d1 *R/Merge_methylation.R
39f7421b7787671426eca948e923e80c *R/Proce_cli.R
0fb1c6d6ebb753ff63f7cac1d8c6d455 *R/TCGA_id_conversion.R
591386d2741ed3e9707312606e438d3f *R/ann_merge.r
f0fe8288d9d79e1cabe80714575cffea *R/calculate_mean_module.R
1b388c8f0ae456278dfe511abd278f19 *R/calculate_mean_profile.R
581f1013f10103fe27761d46de3c9d16 *R/data.R
ffc8272f2a036a0996f86c0bf85c9051 *R/fpkm_count_conversion.r
2230e1899b4fe402a8323ecbe0dd186f *R/id_conversion_all.r
c1be69effb3b7af293e5a7a74a8489c3 *R/kegg_diff_gene.R
e7704eb1efafbb9254f7c1ce788c7714 *R/prepareChi.r
7d481311eae9f26b1eb187154c60c558 *R/rep.R
8ac5ef79f26db0b15361d28f55e101ca *R/sysdata.rda
355d69a8d67c7b85a734850032996375 *README.md
dc970896758acae2e5bdefbc40943f2e *build/vignette.rds
070dceb636fc0300be4b8976b81f767e *data/GSE66705_sample2.rda
26c344440ec0680f674e038a93ce42fb *data/geneExpress.rda
32f4cbf7a8c1a47aaeda3f57c40609ab *data/hgnc.rda
0d27064c8e20b1cc6fd928a98e5812a7 *data/kegg_liver.rda
e7b32221f71207346295f527d6840298 *data/module.rda
44b721329635bc2151cb5dfafaaa0c11 *data/profile.rda
a2654539d5e3d3141966e92ad9606b4a *data/ventricle.rda
354e90b3e7c113472f4a76de66a88202 *inst/doc/GeoTcgaData.R
ae7abda1a730938283fe123a1bc1bbc8 *inst/doc/GeoTcgaData.Rmd
389cc91a37ab4cbc4e0de2ccf3ca2b75 *inst/doc/GeoTcgaData.html
c1f1064d71b9dd78b25eb2395597f2ba *inst/extdata/cnv/00de3/HONGS_p_TCGAb3_75_76_77_NSP_G.txt
7dd1340c0458e7a9b8f5bbf7ba634fcc *inst/extdata/cnv/00e8/MICHE_p_TCGAb_428_429_NS.txt
506237f91f37d1715dad33222854e9a0 *inst/extdata/cnv/00f9/MINAE_p_TCGA_200_202_203_S.txt
61fd34b66933c1b9f5d6cacf9f4c36d3 *inst/extdata/cnv/0a01/KNELT_p_TCGA_b123_131_S.txt
01d01462b432864748c044ebf8a76eb6 *inst/extdata/metadata.cart.2018-11-09.json
3427697aa2de505fa0991654ff8a4ca6 *inst/extdata/methy/0a0b4/jhu-usc.e.H.4.lvl-3.TCGA-13-1405-01A-01D-0460-05.g.txt
4c45f15e7d48280706982a290345ad23 *inst/extdata/methy/0a0b4/logs/file1.parcel
661bc576434d9d90f807d331dca4cd92 *inst/extdata/methy/0a6b/jhu-usc.e.H.10.lvl-3.TCGA-30-1880-01A-01D-0652-05.g.txt
a196acefabd631541ac92ac53de3fd98 *inst/extdata/methy/0a6b/logs/file2.parcel
497fafec0dbefc09bdb13a6bfbf9342e *inst/extdata/methy/0ae7/jhu-usc.H.8.l.I.TCGA-30-1714-01A-02D-0563-05.g.txt
eee6658420b812f0944e0d344e2dbdff *inst/extdata/methy/0ae7/logs/file3.parcel
232d307aa4c04ee203b39c5dba2314ac *inst/extdata/methy/0b32/jhu-usc.e.H.5.l.TCGA-13-1510-01A-02D-0475-05.gdc_hg38.txt
8176387afc23a4e68e9ca359c9c1f842 *inst/extdata/methy/0b32/logs/file4.parcel
00453808795d9ebfdfdc99d1701d1a9a *inst/extdata/tcga_cli/at.orl.TCGA-2V-A95S.xml
02f2857e34873e819d6a1eba5754c18c *inst/extdata/tcga_cli/ati.org.TCGA-2Y-A9GT.xml
b01ae925009c5b86a0e430fe2b9889dc *inst/extdata/tcga_cli/ats.org.TCGA-2Y-A9GS.xml
16594cd6a9411d4bc14265a74ff21b65 *man/GSE66705_sample2.Rd
8638338ab540e2ae041d9566ffcfc158 *man/Merge_methy_tcga.Rd
31adf0d40f4a0b9f14cd15fc161940e5 *man/ann_merge.Rd
e396cb858265b6afe99605ad9febfc6d *man/cal_mean_module.Rd
e88a596bf6b278089e0b0ffcdc35f23c *man/classify_sample.Rd
603f271c63821f3bc6231f01d3d27838 *man/countToFpkm_matrix.Rd
dcd9531285553284244ef6b62cde28d0 *man/countToTpm_matrix.Rd
28af9bab236dc946a34ad7525058372f *man/diff_gene.Rd
d858d9ec00649be83561e2e18faebfb7 *man/differential_cnv.Rd
d2c858fd604f35d5fadfff9e02208ef7 *man/fpkmToTpm_matrix.Rd
a905ea4219e02d19a6d1cbb8c3219934 *man/geneExpress.Rd
8fd4bfe4b5672c2c5b4c1ce4e7abfc3a *man/gene_ave.Rd
96a878f4fae40ac8f18ee93c37f2b3ea *man/hgnc.Rd
5cd6b58bec2a15ff1bd15576648cf520 *man/id_conversion.Rd
204468866d2a5050d0abf05acfc5b200 *man/id_conversion_vector.Rd
600d84a16a3a6cc6fa83dee7470709d2 *man/kegg_liver.Rd
0e220333a43a71d7a47200828ce7564e *man/module.Rd
1782394a8a246c2937ff338508d8da66 *man/prepare_chi.Rd
25788c8cd504b5eee247725bb55c5adb *man/profile.Rd
2c3dccb4a3035a30ba3486c12d69c8c7 *man/rep1.Rd
ae209deb821b36db8123c2914df01482 *man/rep2.Rd
20ccfb260f61de2f2e9c2835d3bc4ec1 *man/tcga_cli_deal.Rd
d973b5901e91754d3069fcc42a0a0182 *man/ventricle.Rd
ae7abda1a730938283fe123a1bc1bbc8 *vignettes/GeoTcgaData.Rmd
