ecd78f32da244479c2a5cdd8f99feac5 *DESCRIPTION
b46e3a041a9faf6aa5e2fa06b0468ab6 *NAMESPACE
778baaeb74bcfeb8050e94ca2dcd9d0d *NEWS.md
c957b9fc7088683a131682ed546dfd79 *R/DiscrepancyPrior-IndLTPrior-class.R
526d13459671ea0fd7fc7f3e35a7f5c2 *R/DiscrepancyPrior-IndSTPrior-class.R
0e2f40795242f8b35187e5106b50f868 *R/DiscrepancyPrior-ShaSTPrior-class.R
dc9d00405608e8969b32e51ebefccc01 *R/DiscrepancyPrior-TruthPrior-class.R
4eccced4af553ff5ab834a192be0b338 *R/EcoEnsemble-package.R
31018edea930abf76019a1d3a36eb459 *R/EnsembleData-class.R
0d8ef05617a51f13695a57a9ecbb6de8 *R/EnsembleFit-class.R
8cfbd796a9d142940984ebe29e6d346f *R/EnsemblePrior-class.R
72608ca4ee49adb4e28c3b7d5326c973 *R/EnsembleSample-class.R
c806b69635bd54c0eb74694575238186 *R/Prior_sampling.R
8a3a9683ed59840cb8eb05e6e113863b *R/RcppExports.R
2791070cbb2075c87d83573fa5840aca *R/data.R
a55c5b9d88fa8c4941baa07dac9b4de2 *R/fit_ensemble.R
4ef56f7b8e303aa67dfb667cc5c63bf5 *R/generate_simulator_stan_data.R
12aeec42e365c2462d7d2b9020333d5c *R/get_stan_outputs.R
53fe6fe03ff9e9344fb1d06e525a61b9 *R/plot_functions.R
34445db823488d1ddfbd4c815c0a2604 *R/prior_functions.R
d951bbdb257166b5b1ed3cc7ce18d1b4 *R/stanmodels.R
4666e6d57a9179cf63dd1b26fa296c50 *R/validation_functions.R
cff499b3e5af6ca03d5d4ceed90d420e *R/validation_prior_functions.R
9cb7123f1c9c44c55dd47e9b2565a382 *README.md
96d4b807669e13c2db0947f525829664 *build/vignette.rds
1cc60bdd8610449d30184e0bb374bf46 *configure
363506993327ae3b7de4216fa3a1aa2b *configure.win
c669264ca6728aeb7158c095ebac44d8 *data/northseamsy.RData
8ba6259960f7c5951d18f0440896d677 *inst/doc/EcoEnsemble.R
e70b183cb561f3ac689339829490f768 *inst/doc/EcoEnsemble.Rmd
1ef60d003cdb66b858fec3396937df82 *inst/doc/EcoEnsemble.html
9ed56da29b3ba4a315ea5da800e9ece0 *inst/doc/ExploringPriors.R
b8f57de77840899b50e68ea2b48cdde9 *inst/doc/ExploringPriors.Rmd
ba4659f69547bf6245158293dc754eb5 *inst/doc/ExploringPriors.html
6b03dfd2ad10749401235c292aca5461 *inst/doc/SyntheticData.R
d6697c6dfb094c432248c10cf5b9c769 *inst/doc/SyntheticData.Rmd
fa1ce8cf1b2c77178f88ece2d28313f6 *inst/doc/SyntheticData.html
855c064dbf8deaff96c8dc8a87169109 *inst/include/stan_meta_header.hpp
5dcd321aaa67848c5b665a7d164a8ac1 *inst/stan/ensemble_model.stan
a2ac94b820a716f544103c5ae6e94093 *inst/stan/ensemble_model_hierarchical.stan
ba398d1bfe3ccbf42df85ce421f72264 *inst/stan/ensemble_prior.stan
69b92574cc1e7ef90fb1d2171c438568 *inst/stan/ensemble_prior_hierarchical.stan
d18e7d40ef78518ae3bdc34f38d401b4 *inst/stan/include/license.stan
6629da5b8cb646daef77b969591c05fb *man/EcoEnsemble-package.Rd
0b16fedde750d5426badb7996d7f36d2 *man/EnsembleData-class.Rd
c77f31e43dd8d599d8265feca9c183eb *man/EnsembleData.Rd
ff8a4fb7ccead19e378cd598cd220b2e *man/EnsembleFit-class.Rd
57e2eebea5e66c34711868da0042d080 *man/EnsembleFit.Rd
6ae0e8d1144409ce6530bd2b0a15abf1 *man/EnsemblePrior-class.Rd
d671bd6759ff5d11cf6488764b160b59 *man/EnsembleSample-class.Rd
d552f0d42b6b9b2bb73b06f75d605af1 *man/EnsembleSample.Rd
f2c0afbb7a5b2a85fb20cc2d52edba7c *man/IndLTPrior-class.Rd
596eadd2d7b40d11dddffafe2b722b6c *man/IndSTPrior-class.Rd
25aa431665087277cf24384b4bd15ece *man/KalmanFilter_back.Rd
7b0b87a815e33fe6f45c4c8ffa424abd *man/PriorConstructorFunctions.Rd
5e69cfb069b1e807a766b321e3bf07a1 *man/SSB_ewe.Rd
a8bb43ecaa5fe35601285ab103f1affc *man/SSB_fs.Rd
e9a4fd79c746831e3045a0363f4045d9 *man/SSB_lm.Rd
13fb8e34326d351574572f95ed72eb08 *man/SSB_miz.Rd
12b63f46df32615673795c1629fbfdac *man/SSB_obs.Rd
8b24f70d1ec95b2956c8c51fec06ab84 *man/ShaSTPrior-class.Rd
06fd376df134f069a88a8d9365a9a508 *man/Sigma_ewe.Rd
36f3d5f921247d3e5c279b671ad22198 *man/Sigma_fs.Rd
d7390272a73b58c1907614d54b1df2a4 *man/Sigma_lm.Rd
bdd6b25dda231908755b205ed9c22e5f *man/Sigma_miz.Rd
1d5cf97608e03c369762ca519a09e201 *man/Sigma_obs.Rd
7368894eb483173ca6627ac89c27c5cf *man/TruthPrior-class.Rd
fcdc12f3664cd0b55a4f184f5eb9606a *man/figures/fitted_model.bmp
32f81c3064a2ceac417b69971fa39804 *man/fit_ensemble_model.Rd
ec28f9e7fd95431a9c88689f419a43c8 *man/get_mcmc_ensemble_model.Rd
f5185ab5f8c7638f87b78a7feb668f93 *man/get_stan_outputs.Rd
4101d8e760109e34eed8695582048f29 *man/plot.EnsembleSample.Rd
31248986d91a052e6f923aca0fa6ea1b *man/prior_ensemble_model.Rd
3a927b708e4d8eab36968a2ba3775f7d *man/sample_prior.Rd
db8e49e61405cb2eb4df0c4788d4e0d8 *src/KF_back.cpp
aef2e19deaa4ea39b114dbc414caa3ce *src/RcppExports.cpp
8f19443587b6acc6eb41793b7e3e15f9 *tests/testthat.R
ee26f9b741e8df905d89fca7fefde19e *tests/testthat/test-Prior_sampling.R
89b18d3814e0730c97ccfc335190b019 *tests/testthat/test-post_process.R
37f07562091cf2c5d791e88b94363184 *tests/testthat/test-prior_coms.R
f0432286a17860abc804c89f4440e718 *tests/testthat/test-prior_functions.R
999c0b86d274f107ab126089ef31e44d *tests/testthat/test-validation_functions.R
e70b183cb561f3ac689339829490f768 *vignettes/EcoEnsemble.Rmd
b8f57de77840899b50e68ea2b48cdde9 *vignettes/ExploringPriors.Rmd
d6697c6dfb094c432248c10cf5b9c769 *vignettes/SyntheticData.Rmd
eb3f6738790966c70902afe59b4d918b *vignettes/data/ExploringPriors_HierBetaDensities.RData
f1df7c80ee3aaa5db7c236123d08cd28 *vignettes/data/ExploringPriors_HierGammaDensities.RData
e82339d246a521a99b384e775527ad69 *vignettes/data/ExploringPriors_invWishartDensities.RData
15f31f137cf4b8ad8a260d40321c2da7 *vignettes/data/SyntheticData_AddingModelsData.RData
a66ae781627d8852516d74d10747b300 *vignettes/data/SyntheticData_PriorSamples.RData
6fdbce2fb2482e3cb6ffdfdc728c4829 *vignettes/data/p_NumberOfModels.png
d6ea305d1fb51e0a7b9e85c00249f3b7 *vignettes/data/p_priors.png
de451e5c6b80b50a02b70e44de61db10 *vignettes/data/p_truth.png
99bffde9ceef8e75b415d70d08a34659 *vignettes/data/plot_initial_customised.png
54605302a4296c8136f4bae8fd45edbf *vignettes/data/plot_initial_outputs.png
25834460c664312b0dfa7a560e572c34 *vignettes/data/plot_priors_only.png
