c6ce948b06c33fc56dacb836fabd4163 *ChangeLog
5a2167d39c99005114a8b53be4ff53e0 *DESCRIPTION
5cb93fcd931daf81b183f8fa903e4c0b *NAMESPACE
49ed5e8333a12cfd817804f1d9ab97b0 *NEWS
4e79915db7371bb028b1d50e004ec652 *R/Egambia.R
9dfe5d8972cf5157b932212a8653e669 *R/classes.R
a92632c1cec14aa1e484b8d846fad606 *R/helpers.R
3c58184bbbda322c4bde4bd8be01a989 *R/importexport.R
a2d6a317d65136b0c7064bc639a006b2 *R/lem.R
dee6af30ad8229bb10551a19cbef11c4 *R/limma.R
3833832d3f9e80c41b3cc04a026a3d57 *R/modmetabo.R
a08bed88a25ea712396010a254e56796 *R/modstats.R
efa3abee89c98c1301200aca0c2643b4 *R/multivariate.R
16c6a374171cce73ab0f5c017fc6a099 *R/panelplots.R
cd8170129b9e23b3a7dcd1cf82edeab2 *R/plotwidgets.R
cc9c74719a4a33aecac22d52b7637134 *R/statisticaltests.R
f594abdcb0c3242448dd4c38be07c1dd *R/tmod-data.R
dcbfd5bf32454d4476219d9ef6b99413 *R/tmod-package.R
df55185dc97e56aa6f30b5f238235e79 *R/tmodSummary.R
575ab3de5b1cf62c6249bd2ec53b2c0b *R/visualizations.R
05dcc65291dd5d20afc12b40cbcf9316 *README.md
f3b70ad780822eb0d0e7c2bfa9a18dc1 *build/vignette.rds
4f6f3127d48f68bfbcd8c729be8137d2 *data/Egambia.rda
802cc31ee8a48730ee1e9a3220d338fd *data/datalist
53137a15b46ee6853ade15b90b925ca8 *data/modmetabo.rda
80aa3c52f315c186ff8935dfce0fe9a8 *data/tbmprof.rda
09f033888a3e6925eb459af3dc523536 *data/tmod.rda
c47cbea38a33667789f8b40507e0cb3e *data/vaccination.rda
e4ed0d16e068d75426cb26ec0c328011 *inst/doc/tmod_gallery.R
4e19246423f426febf8a492621bb4764 *inst/doc/tmod_gallery.Rmd
f51e0e7cae333f56b73e4e012f583706 *inst/doc/tmod_gallery.html
1db18da55ce8ef51f75f6c28bcc54638 *man/Egambia.Rd
feb1d1c67029e11c7e7689065de7f50d *man/eigengene.Rd
dadd6629500fe4b7a6143c77d19849c6 *man/evidencePlot.Rd
4af1044ca628f6c25dfc2a9d18d356a6 *man/extract-methods.Rd
e3cd6a6e2dae940542a1fb9a61dbec4b *man/getGenes.Rd
42decc6a10bfff966f947fdc2fabf806 *man/getModuleMembers.Rd
465f5346519315842aac094e878e0199 *man/hgEnrichmentPlot.Rd
b6c33ed30d029a01c676a9ac62f8e397 *man/length.Rd
dde935070df810c07bc32437e12c91fa *man/makeTmodFromDataFrame.Rd
f544b989790b946aead53d8771ebaf85 *man/mbind.Rd
ecc37d94c665ef3b2aaf424a75ae2c09 *man/modCorPlot.Rd
3a82ffc58135e70fc0be487ca4bb3cdf *man/modGroups.Rd
b41b64402ecdc6a81baa91d7358d95ed *man/modOverlaps.Rd
cb9f68ada3e61ffaf11935d5a8b12ef6 *man/modcors.Rd
e0958edb0537d68dc973b80ffb4e6728 *man/modjaccard.Rd
9136cbf82c3300b6997b0ab17a4cf51d *man/modmetabo.Rd
d1d9ff994eb4519b0373affe47442aa2 *man/mtx2mset.Rd
a192fea683ec6fbda115d099f8f9ccca *man/pcaplot.Rd
f3018e8dd6ad1c2dc62022763aa6b857 *man/pvalEffectPlot.Rd
194cb4557d9bc007da5c28271882dfe8 *man/renameMods.Rd
68c7b010880821394d7b3e547d98c0bc *man/showGene.Rd
1ae18f8cef5d84f7c9424953a7055eaf *man/showModule.Rd
b5b1c9307b830147edba4e33e7787c4a *man/simplePie.Rd
dc095485ddd02a4094b329d80544d13a *man/tmod-class.Rd
34f3001ea0247295c75d8e415208f147 *man/tmod-data.Rd
b23257c771dd803da015ec65ded0ff4a *man/tmod-package.Rd
f58d09edacd18e69d4f1bc7ddd08ff16 *man/tmod2DataFrame.Rd
78f7c2c050fd60e4ba976a6d44937079 *man/tmodAUC.Rd
619ff543cf355c8152f9c4fefd97bafb *man/tmodDecideTests.Rd
fd8662daa8e67194b5886abead200f97 *man/tmodImportMSigDB.Rd
bd787817e1e2f75ef354545034ea9e66 *man/tmodLEA.Rd
e05ea53f7a90f066cd047b9562cac41f *man/tmodLEASummary.Rd
0e8226c426e6e3352d645a515f7fa325 *man/tmodLimmaDecideTests.Rd
5edf9d1073fa77c8786e815df7af0646 *man/tmodLimmaTest.Rd
6e048e4735cb64e2a3ff0977a11f7b72 *man/tmodLimmaTopTable.Rd
f8578c03c1105e0ceeda71b20a1b56a0 *man/tmodPCA.Rd
cca85ecf43318d762cdb940748680c38 *man/tmodPal.Rd
513ad69bc06eaec14e982e04deef71fc *man/tmodPanelPlot.Rd
935f7fd81e3a81b6aeae004eec59ba55 *man/tmodSummary.Rd
915349e6c1a3c2aa8a5f5322bfb4fb9c *man/tmodTagcloud.Rd
72702962d4ae289d71e09e116f66b6e8 *man/tmodUtest.Rd
82bba88af71b3f39ae3ae923d999f45d *man/upset.Rd
05c98927b192755bec48dade08702403 *man/vaccination.Rd
46609a77059ef7cf25c82679f759a2df *tests/testthat.R
35971cea435b34a368f7ba3cf3a40587 *tests/testthat/res_CERNO.csv
bbf9c68364179b1885512fb6790ad11e *tests/testthat/res_HG.csv
87a5bccf92e912023bd14e3985470f61 *tests/testthat/res_U.csv
92dfcaa9759ab8b307f47e302801fb8d *tests/testthat/sample_data.csv
2f6e28d26ee0e1543a28ed5e9d0b00a4 *tests/testthat/test_data.R
db82fc8a1aa6a9c7c8a112f69704ad77 *tests/testthat/test_tests.R
e807acad03d19660685556f35c8d6564 *vignettes/tmod.pdf
eeafae48c046fe43074d0cac0bbffa32 *vignettes/tmod.pdf.asis
4e19246423f426febf8a492621bb4764 *vignettes/tmod_gallery.Rmd
