Package: marked
Version: 1.1.3
Date: 2013-11-22
Title: R Code for mark-recapture analysis
Author: Jeff Laake <jeff.laake@noaa.gov>, Devin Johnson
    <devin.johnson@noaa.gov>, Paul Conn <paul.conn@noaa.gov>
Description: This package provides a framework for handling
    data and analysis for mark-recapture.
    Currently it is limited to Cormack-Jolly-Seber and
    Jolly-Seber models.
Depends: R (>= 2.15.0)
Imports: R2admb, truncnorm, coda, optimx (>= 2013.8.6), ggplot2,
        Matrix, numDeriv, Rcpp (>= 0.9.13), plyr
LinkingTo: Rcpp
Suggests: RMark
SystemRequirements: ADMB version 11 (http://admb-project.org/) for
        use.admb=TRUE; see readme.txt
LazyLoad: yes
License: GPL (>= 2)
Maintainer: Jeff Laake <Jeff.Laake@noaa.gov>
Collate: 'cjs.accumulate.R' 'cjs.initial.R' 'cjs.lnl.r' 'cjs.R'
        'create.dm.R' 'create.dmdf.R' 'create.links.r' 'crm.R'
        'fix.parameters.r' 'js.lnl.r' 'js.r' 'hmmDemo.r'
        'make.design.data.R' 'marked-package.R'
        'merge.design.covariates.r' 'print.crm.r' 'process.ch.R'
        'process.data.R' 'setup.model.R' 'setup.parameters.R'
        'utility.R' 'valid.parameters.R' 'zzz.R' 'probitCJS.R'
        'splitCH.R' 'cjs.hessian.r' 'extract.fcts.r' 'summary.fcts.R'
        'crm.wrapper.R' 'js.hessian.R' 'js.accumulate.R'
        'compute.real.R' 'convert.link.to.real.r'
        'deriv.inverse.link.R' 'inverse.link.R' 'predict.crm.r'
        'scale.r' 'set.initial.r' 'mscjs.r' 'mixed.model.r'
        'HMMLikelihood.r' 'Transition_functions.r'
        'Observation_functions.r' 'simHMM.r'
        'InitialDistribution_functions.r' 'probitMsCJS.R' 'set.fixed.R'
        'proc.formula.r'
Packaged: 2013-11-22 23:30:44 UTC; JLaake
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2013-11-23 06:48:16
