e9bea6121365dec1ed085943ed12981a *DESCRIPTION
5d82e9946ace180a66d2fe6db26780f1 *LICENSE
124aaee3aef57777f96706e560b173c6 *NAMESPACE
df19d72c89d1f4c97aa240c0c2f458fd *R/RcppExports.R
54e11d92ae6cabc9166bbd9ec5d2dd7f *R/auc.calculate.R
bb9f0c7101b24f890345630e49642827 *R/compute.gene.rank.R
100ad72ff6ed9c5a5136905f3b3c5593 *R/data.R
847eb92cfddda3dbda03b7c5c67a09a8 *R/inferCSN-package.R
edf02e7164985afe9c59cf79913086b9 *R/inferCSN.R
3dcaa4b9000a4cb5285477ba35988fc5 *R/network.visualization.R
81a0533e9aa50e506b2f54da19da71f4 *R/sparse.regression.R
ac13512fc40c4ff2a58763b008c504b0 *R/utils.R
fc83289257f8a1e14e18e8e913d254c2 *README.md
191a298ed75823937c77adad132f746b *data/exampleGroundTruth.rda
975775272629b1e1438f9c89883e7728 *data/exampleMatrix.rda
9b9c13ac9a7e999c4e4cdb362fc26e8e *man/acc.calculate.Rd
5006924bd51bacb79492faac184edc4b *man/auc.calculate.Rd
755d9e5cd7a14309d094b88dc7913baf *man/check.parameters.Rd
cd8c767751171c96e056e3d80893d6e8 *man/coef.inferCSN.Rd
32c4e754a970b62575f8b7f62f562a18 *man/compute.gene.rank.Rd
0e2acac6074c6d1148f7157f2166271e *man/contrast.networks.Rd
6f547c7e004ad4c6636b56e991b66a7e *man/dynamic.networks.Rd
6fc6a36a0f6dedfd857d9eb59febf847 *man/exampleGroundTruth.Rd
2087072cadfb91949bc87db28efb0284 *man/exampleMatrix.Rd
4cde6e83b2d3b96a27c12cd1ba8e0091 *man/figures/inferCSN.svg
34c2dd574f80faa89edea7cebdbb042c *man/inferCSN-package.Rd
aa7762806e060cba0da53b0b41aa24a2 *man/inferCSN.Rd
814dd419ee7301a4e93848a20890ad01 *man/inferCSN.fit.Rd
af3a9d9f4bbf39e214377b9920d4d3b0 *man/is.scalar.Rd
f4863762ccc5a9b3ea765395905d20e0 *man/net.format.Rd
447aa592fb38dba8e88937ed73204801 *man/network.heatmap.Rd
e9d98b090265e8645318543f37e8bf24 *man/predict.inferCSN.Rd
1b4a2a6e2c1eed3ca4a3a0003c5c97f6 *man/print.inferCSN.Rd
9196eb6d5076b59da50ade72aadf75c3 *man/sparse.regression.Rd
9b11dcc00cdcf5b4962435dd1e6463b0 *man/sub.inferCSN.Rd
0347ffda63bae663f9354d1e0b948d57 *src/BetaVector.cpp
dadb1987bfb2f80d199a2e25b02a051d *src/CDL012LogisticSwaps.cpp
64737baec03e2641f58d5681381874d6 *src/CDL012SquaredHingeSwaps.cpp
6a4f677eff1881a88c670cf19c77773c *src/CDL012Swaps.cpp
2e4e9b0639d3f1afc4cf99411a293b67 *src/DT2Matrix.cpp
d4f2e65104193ad8b04b23281a39cd8c *src/Grid.cpp
2ebc2a8b814581ce38dd0a53cf275ce5 *src/Grid1D.cpp
8748c274ffef69c8dc7f2c0f88228b22 *src/Grid2D.cpp
09837ef4410ca3aa193eb60b7a8f681b *src/Interface.cpp
c2fbbe606dbc01e99513a08efa77bb27 *src/Makevars
c2fbbe606dbc01e99513a08efa77bb27 *src/Makevars.win
41bc93afdbfbce896558b943b882d7e7 *src/Normalize.cpp
bcd102094770a2e20628f6cb0dfc4684 *src/RcppExports.cpp
b8da420687f2f9943625f9c8cddda799 *src/Test_Interface.cpp
e447698f0493b967abd0e0aaf2eca2c2 *src/include/BetaVector.h
e9aab72b23846ad7db4b0fa1e2597d09 *src/include/CD.h
3006562807501591e7979d1b5af7c039 *src/include/CDL0.h
c9262d8cc37f5ad121511ab15f1ef234 *src/include/CDL012.h
da6865571ac3a696ef96d8d10c8b7c9a *src/include/CDL012Logistic.h
c36020aa6b5463f99a6265a18d745473 *src/include/CDL012LogisticSwaps.h
75978be275c2af4e57318dda1d2ee505 *src/include/CDL012SquaredHinge.h
6acf66ba1b050b4869097aa56ed7cb10 *src/include/CDL012SquaredHingeSwaps.h
8d625ee2d1001e5fbd827359787faa78 *src/include/CDL012Swaps.h
3c65caa73f70506f9914640898d13c6a *src/include/CDSwaps.h
3e191a22fe2bee08cfd53dd8cd32f8a1 *src/include/FitResult.h
fa0e95061a24b8e548c611d4304664d0 *src/include/Grid.h
1e34795fcfd7f91aa821223794050e00 *src/include/Grid1D.h
5155c4b89da70421f47b4e82a0111866 *src/include/Grid2D.h
5f89a8eaba4ab540eb63046a1e83dbe6 *src/include/GridParams.h
3754bebf455414fb993fd10bfc967742 *src/include/Interface.h
68b70f6c4a8c08a8d7f6bb97746d3d49 *src/include/MakeCD.h
aea94cb863ab3243b5c681f9d905c175 *src/include/Model.h
8650499eeb16d4bf88397c8ed3c29c92 *src/include/Normalize.h
cdde68a3cfff76e8a18c34209800bea5 *src/include/Params.h
0816e979947d47e1e91c6327a62d641c *src/include/Test_Interface.h
f3a3cce4a45a5306180127b28e5aa66c *src/include/utils.h
82ebc8c76e0a000e5bf6e391edd49ff3 *src/utils.cpp
df29c8d17f04b962a3e708bf14894528 *tests/testthat.R
f5308b3a8977a0ede564b85be6086740 *tests/testthat/test-inferCSN.R
