5e528d074751b8b02a7fbaace8c01a0e *DESCRIPTION
9f49e6abdb4d787202443c08418e8994 *NAMESPACE
9a63ff575a9e626669b296a1995c396a *R/accessors.R
8cd3be9bb2b4f3255a01234e5838dcf7 *R/add.gaps.R
0571eb4d2efb6c6fb194763d6747e974 *R/concatenate.R
03a3f74a056bb6892801cdc1b861a362 *R/datasets.R
e914470e4a596b3ea965a232e22dcd26 *R/dist.R
d02f8a37ac063036ca9a2c9acec69476 *R/doc.R
642fc2b1a2843aece4ef8d99b0171927 *R/exports.R
b80a27b5831f4e2594d5db38e4d480f2 *R/getTree.R
4403c757553d0637b30d5e3674045b2e *R/internal.R
59ff39655b8dff0678bf46fbd7428d6f *R/multidna.class.R
286d32365319e5d57b624384190f7728 *R/multidna.constructor.R
49208445e99af271bc50e5217d9abc89 *R/multiphyDat.class.R
0cb79ed222e1e390af3274420eee4e5f *R/multiphyDat.constructor.R
fc3d34dc98511d608fca650d1bf727d2 *R/plot.R
c10e5d64e50ff8dc19d463b493c724b4 *R/readfiles.R
7a963df75888f19ee8a8af40f3210ac2 *R/rm.gaps.R
28f08fccf04bfe13186eb0deec9f5bf8 *R/show.R
22bc0c9246db8a77608e142af82649de *R/subset.R
534a158d5eea4213dd1a36ee436ab4c2 *README.md
14c75a7d138ca4caf82587b0b9e7ba01 *build/vignette.rds
578526a8489651f18fa1d0d421a58090 *inst/doc/apex.R
124534783206773fc894ff8f504486d2 *inst/doc/apex.Rmd
435b4d99d4ff29b362fc88334b8d09a4 *inst/doc/apex.html
9153e1e71df1d0ffdaee7e69f291b93b *inst/patr_poat43.fasta
49ae6851973377bde9287e1f12e17039 *inst/patr_poat47.fasta
80b8bdab91a3bd769896fb921d670562 *inst/patr_poat48.fasta
b261f01a6b74f7ef51f605faac4fd68f *inst/patr_poat49.fasta
068ec2c54febb70f54198c5cbf060161 *man/accessors.Rd
cf1aaa151893b3f5a869743357769226 *man/add.gaps.Rd
d477adf0bfa2d8213c2e5c6c962093f9 *man/apex.Rd
7e48a36bb4a5622364fbd117b28c7951 *man/concatenate.Rd
d285108f337e8df292907ccdbdb84577 *man/dist.multidna.Rd
70529b42b079543f116eec7f3c058c8a *man/getTree.Rd
4b988a4952532742659a912292be1d79 *man/initialize-multidna-method.Rd
7ee7b620409604741a9241e0f4e4c149 *man/initialize-multiphyDat-method.Rd
2aa2902020daa388f359f0969c7160bc *man/multidna.Rd
19175d593ea66171c64a8543d53dadf9 *man/multidna2alignment.Rd
46fe1774c89c12e0335e0e2c26cc7321 *man/multidna2genind.Rd
52a872b33a20351032dc733477492fda *man/multidna2multiphyDat.Rd
6f685b93b9651ef9953c29efc2895b71 *man/multiphyDat.Rd
98577a801ad53d50a5093737336e979a *man/plot-multidna-ANY-method.Rd
c940aa20c70356c91dbf595d199d432d *man/readfiles.Rd
41ffc3fd512e9f2893b2ff97af27679c *man/rm.gaps.Rd
1cce5b3828f164fa2482de4540a8b461 *man/show-multidna-method.Rd
0b0df7dbb1dc284918785588c5783853 *man/show-multiphyDat-method.Rd
569ceb909d4b468f70e1d18ad827567c *man/subset.multidna.Rd
77cae94d75d005e65dc4860894d61e2a *tests/testthat.R
0729339aeed636286b479f53621bcef7 *tests/testthat/test_export.R
124534783206773fc894ff8f504486d2 *vignettes/apex.Rmd
fca380e47e6082e2220472c8816d552f *vignettes/apex.md
f512f3d9d0de04c38c4496c1caf73e20 *vignettes/figs/class-1.png
4329f4dcb0537b6d5217953933822f99 *vignettes/figs/class-2.png
8dbac269a9498d4360b622cfb01d87d0 *vignettes/figs/concat-1.png
e495022edef68c32145a5fd1f69c88b8 *vignettes/figs/concat-2.png
6753355981520de322e16e41585c4cb4 *vignettes/figs/handling-1.png
f17f827f158e2d509ae453a5d0bcbbb8 *vignettes/figs/handling-2.png
e8c24a07a3e9ce0f1fee860cd89f8a4f *vignettes/figs/multidnaclass-1.png
0a7bcf34a54503dc79639439e6c40e3e *vignettes/figs/multidnaclass-2.png
04ae90781dba3d5946aa4e3091d69c64 *vignettes/figs/plotMultiPhylo-1.png
07e30ad059b194de386fc3494beb241f *vignettes/figs/plotPhyloSingle-1.png
3cd46e6ea91cfdc35286428e6e0245ba *vignettes/figs/plotPmlPart-1.png
6753355981520de322e16e41585c4cb4 *vignettes/figs/readfiles-1.png
