* using log directory 'd:/Rcompile/CRANpkg/local/4.7/sbm.Rcheck'
* using R Under development (unstable) (2026-09-21 r90579 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.3.0
    GNU Fortran (GCC) 14.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* current time: 2026-09-24 23:34:18 UTC
* checking for file 'sbm/DESCRIPTION' ... OK
* this is package 'sbm' version '0.4.7'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'sbm' can be installed ... OK
* used C++ compiler: 'g++.exe (GCC) 14.3.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [4s] OK
* checking whether the package can be loaded with stated dependencies ... [3s] OK
* checking whether the package can be unloaded cleanly ... [3s] OK
* checking whether the namespace can be loaded with stated dependencies ... [4s] OK
* checking whether the namespace can be unloaded cleanly ... [3s] OK
* checking loading without being on the library search path ... [3s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [13s] OK
* checking Rd files ... [1s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... [1s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compiled code ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [28s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [20s] OK
  Running 'spelling.R' [0s]
  Running 'testthat.R' [19s]
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [79s] ERROR
Error(s) in re-building vignettes:
--- re-building 'Multipartite_EcologicalNetwork.Rmd' using rmarkdown
--- finished re-building 'Multipartite_EcologicalNetwork.Rmd'

--- re-building 'MultiplexNetwork_principle.Rmd' using rmarkdown
--- finished re-building 'MultiplexNetwork_principle.Rmd'

--- re-building 'Multiplex_allianceNwar_case_study.Rmd' using rmarkdown
--- finished re-building 'Multiplex_allianceNwar_case_study.Rmd'

--- re-building 'SBM_fungus_tree_network.Rmd' using rmarkdown

Quitting from SBM_fungus_tree_network.Rmd:285-289 [plot bipartite meso]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `asMethod()`:
! lazy-load database 'D:/temp/2026_09_24_01_50_00_23554/Rtmpy6qIJG/RLIBS_1f38474d319a8/Matrix/R/Matrix.rdb' is corrupt
---
Backtrace:
     ▆
  1. ├─base::plot(...)
  2. └─sbm:::plot.SBM(...)
  3.   └─x$plot(type, ordered, plotOptions)
  4.     └─sbm:::plotMeso(...)
  5.       ├─base::suppressWarnings(...)
  6.       │ └─base::withCallingHandlers(...)
  7.       └─igraph::graph_from_incidence_matrix(alpha.norm, weighted = TRUE)
  8.         └─igraph::graph_from_biadjacency_matrix(...)
  9.           └─igraph:::graph_incidence_build(...)
 10.             └─methods::as(incidence, "dgCMatrix")
 11.               └─Matrix (local) asMethod(object)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'SBM_fungus_tree_network.Rmd' failed with diagnostics:
lazy-load database 'D:/temp/2026_09_24_01_50_00_23554/Rtmpy6qIJG/RLIBS_1f38474d319a8/Matrix/R/Matrix.rdb' is corrupt
--- failed re-building 'SBM_fungus_tree_network.Rmd'

SUMMARY: processing the following file failed:
  'SBM_fungus_tree_network.Rmd'

Error: Vignette re-building failed.
Execution halted

* checking PDF version of manual ... [21s] OK
* checking HTML version of manual ... [4s] OK
* DONE
Status: 1 ERROR