'Shiny' GUI for the 'biocharkit' Biochar Analysis Toolkit


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Documentation for package ‘biocharkitgui’ version 0.3.0

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gui_adsorption Compute adsorption capacity and removal efficiency from an uploaded data frame
gui_bet BET surface area from an uploaded data frame
gui_correlation Correlation matrix for display, in long format
gui_datatable Render a data frame as an interactive DT table
gui_ftir_autopeaks Automatic FTIR peak picking from an uploaded full spectrum
gui_ftir_baseline Baseline-correct an FTIR spectrum from an uploaded data frame
gui_ftir_density Functional-group density from an uploaded full FTIR spectrum
gui_ftir_peaks Assign FTIR peak positions to functional groups
gui_isotherm Fit an adsorption isotherm from an uploaded data frame
gui_isotherm_batch Fit an adsorption isotherm separately per group in an uploaded data frame
gui_kinetics Fit adsorption kinetics from an uploaded data frame
gui_kinetics_batch Fit adsorption kinetics separately per group in an uploaded data frame
gui_list_sheets List sheet names in an uploaded Excel workbook
gui_parse_ids Parse sample IDs from an uploaded data frame
gui_preview Preview the first rows of an uploaded data frame
gui_proximate Proximate analysis from an uploaded data frame
gui_read_excel Read a sheet of an uploaded Excel workbook into a data frame
gui_render_report Render the combined session report
gui_snapshot_png Snapshot a base-graphics plotting expression to a PNG file
gui_tga_curve Build a canonical TGA curve data frame from uploaded columns
gui_tga_kissinger Kissinger non-isothermal kinetics from an uploaded multi-heating-rate table
gui_tga_stages Proximate analysis directly from an uploaded TGA curve
gui_tga_stages_batch Proximate analysis from TGA curves, separately per sample in an uploaded long-format data frame
gui_ultimate Ultimate (CHNS) analysis atomic ratios from an uploaded data frame
gui_vant_hoff Van't Hoff thermodynamic analysis from an uploaded data frame
gui_write_csv Write a results data frame to CSV (no row names)
gui_xrd_ci XRD crystallinity index for one or more samples
gui_xrd_deconvolve XRD peak deconvolution from an uploaded data frame
run_biocharkit_gui Launch the biocharkit Shiny GUI