tidydr: Unify Dimensionality Reduction Results

Dimensionality reduction is widely used in many domains for analyzing and visualizing high-dimensional data. 'tidydr' provides uniform output and is compatible with multiple methods, including 'prcomp', 'cmdscale', 'Rtsne', 'umap' and 'metaMDS'. Any function returning a numeric matrix can also be used. The unified result can be visualized directly with 'ggplot2', and several methods can be run and compared in a single call.

Version: 0.0.7
Imports: cluster, ggfun, ggplot2, grid, rlang, stats, utils
Suggests: knitr, rmarkdown, prettydoc, SingleCellExperiment, SummarizedExperiment, ape, MASS, Rtsne, uwot, vegan, smacof, ecodist, ade4, labdsv, testthat (≥ 3.0.0)
Published: 2026-10-09
DOI: 10.32614/CRAN.package.tidydr
Author: Guangchuang Yu ORCID iD [aut, cre, cph], Shuangbin Xu ORCID iD [aut]
Maintainer: Guangchuang Yu <guangchuangyu at gmail.com>
BugReports: https://github.com/YuLab-SMU/tidydr/issues
License: Artistic-2.0
URL: https://github.com/YuLab-SMU/tidydr/
NeedsCompilation: no
Materials: README, NEWS
CRAN checks: tidydr results

Documentation:

Reference manual: tidydr.html , tidydr.pdf
Vignettes: tidydr (source, R code)

Downloads:

Package source: tidydr_0.0.7.tar.gz
Windows binaries: r-devel: tidydr_0.0.6.zip, r-release: tidydr_0.0.6.zip, r-oldrel: tidydr_0.0.6.zip
macOS binaries: r-release (arm64): tidydr_0.0.7.tgz, r-oldrel (arm64): tidydr_0.0.7.tgz, r-release (x86_64): tidydr_0.0.7.tgz, r-oldrel (x86_64): tidydr_0.0.7.tgz
Old sources: tidydr archive

Reverse dependencies:

Reverse imports: enrichplot, ggsc

Linking:

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