Last updated on 2025-12-10 05:50:53 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.44 | 244.99 | 257.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.12 | 244.34 | 255.46 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 31.00 | 284.18 | 315.18 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 18.00 | 184.00 | 202.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.70 | 287.77 | 303.47 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.16 | 251.46 | 265.62 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 175.00 | 185.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 13.00 | 205.00 | 218.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 232.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/110s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.524, system: 0.036, elapsed: 2.045 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.613, system: 0.077, elapsed: 12.673 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.014, elapsed: 0.276 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.985, system: 0.188, elapsed: 6.029 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.007, elapsed: 0.263 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.079, system: 0.353, elapsed: 22.064 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.499, system: 0.027, elapsed: 2.425 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.616, system: 0.059, elapsed: 13.770 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.012, elapsed: 0.308 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.936, system: 0.163, elapsed: 6.329 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.004, elapsed: 0.289 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.000, system: 0.301, elapsed: 24.047 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.590, system: 0.032, elapsed: 2.620 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.588, system: 0.084, elapsed: 14.230 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.011, elapsed: 0.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.970, system: 0.179, elapsed: 5.753 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.004, elapsed: 0.242 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.225, system: 0.230, elapsed: 1.017 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.410, system: 0.585, elapsed: 25.153 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.553, system: 0.033, elapsed: 2.027 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.614, system: 0.078, elapsed: 12.076 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.012, elapsed: 0.234 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.992, system: 0.184, elapsed: 5.383 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.003, elapsed: 0.224 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.498, system: 0.439, elapsed: 11.516 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.694, system: 0.771, elapsed: 32.300 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/106s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.577, system: 0.037, elapsed: 2.143 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.549, system: 0.082, elapsed: 12.622 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.013, elapsed: 0.271 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.842, system: 0.199, elapsed: 5.412 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.004, elapsed: 0.218 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.894, system: 0.358, elapsed: 21.444 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.569, system: 0.034, elapsed: 1.887 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.560, system: 0.072, elapsed: 11.214 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.011, elapsed: 0.207 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.761, system: 0.165, elapsed: 5.171 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.003, elapsed: 0.183 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.803, system: 0.310, elapsed: 19.397 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.645, system: 0.052, elapsed: 2.565 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.602, system: 0.110, elapsed: 13.957 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.012, elapsed: 0.268 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.724, system: 0.166, elapsed: 5.263 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.226 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.125, system: 0.225, elapsed: 1.087 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.104, system: 0.616, elapsed: 24.271 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.559, system: 0.032, elapsed: 2.114 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.399, system: 0.056, elapsed: 12.310 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.012, elapsed: 0.270 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.858, system: 0.185, elapsed: 5.457 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.004, elapsed: 0.261 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.724, system: 0.471, elapsed: 13.416 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.552, system: 0.784, elapsed: 34.727 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64