Last updated on 2024-06-21 09:56:09 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| RCPA | 4 | 3 | 6 |
| scDHA | 1 | 3 | 9 |
Current CRAN status: ERROR: 4, NOTE: 3, OK: 6
Version: 0.2.2
Check: examples
Result: ERROR
Running examples in ‘RCPA-Ex.R’ failed
The error most likely occurred in:
> ### Name: getEntrezAnnotation
> ### Title: Get Entrez annotation
> ### Aliases: getEntrezAnnotation
>
> ### ** Examples
>
>
> library(RCPA)
> geneAnno <- getEntrezAnnotation(c("77267466", "77267467"))
No encoding supplied: defaulting to UTF-8.
Warning in getEntrezAnnotation(c("77267466", "77267467")) :
The data source is temporarily unvailable. Please try it again later or contact the maintainer(s) to solve this issue.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-oldrel-windows-x86_64
Version: 0.2.2
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘hgu133plus2.db’
Flavor: r-release-macos-arm64
Version: 0.2.2
Check: whether package can be installed
Result: ERROR
Installation failed.
Flavor: r-release-windows-x86_64
Version: 0.2.2
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'ROntoTools', 'hgu133plus2.db', 'oligo'
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Current CRAN status: ERROR: 1, NOTE: 3, OK: 9
Version: 1.2.2
Check: installed package size
Result: NOTE
installed size is 7.3Mb
sub-directories of 1Mb or more:
data 4.1Mb
libs 2.9Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 1.2.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [2s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
Backtrace:
▆
1. └─scDHA::scDHA.vis(result, ncores = 2, seed = 1) at test-scDHA.R:21:3
2. └─uwot::umap(data, n_threads = ncores)
3. └─uwot:::uwot(...)
4. └─uwot:::spectral_init(V, ndim = n_components, verbose = verbose)
5. └─uwot:::irlba_tsvd_normalized_laplacian_init(A, ndim, verbose = FALSE)
6. └─uwot:::irlba_spectral_tsvd(L, ndim + 1)
7. ├─base::suppressWarnings(...)
8. │ └─base::withCallingHandlers(...)
9. └─irlba::irlba(L, nv = n, nu = 0, maxit = iters)
[ FAIL 1 | WARN 0 | SKIP 2 | PASS 3 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-arm64