CRAN Package Check Results for Maintainer ‘Bryan A. Hanson <hanson at depauw.edu>’

Last updated on 2024-07-13 11:49:44 CEST.

Package ERROR NOTE OK
ChemoSpec 1 12
ChemoSpec2D 1 12
ChemoSpecUtils 13
exCon 13
FuncMap 13
HiveR 6 7
LearnPCA 13
LindenmayeR 13
readJDX 13
roxut 13
SpecHelpers 13

Package ChemoSpec

Current CRAN status: NOTE: 1, OK: 12

Version: 6.1.10
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: aovPCAloadings.Rd: GraphicsOptions plot2Loadings.Rd: GraphicsOptions plotLoadings.Rd: GraphicsOptions plotSpectra.Rd: GraphicsOptions reviewAllSpectra.Rd: GraphicsOptions sPlotSpectra.Rd: GraphicsOptions surveySpectra.Rd: GraphicsOptions Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavor: r-devel-windows-x86_64

Package ChemoSpec2D

Current CRAN status: NOTE: 1, OK: 12

Version: 0.5.0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: hats_alignSpectra2D.Rd: rowDist Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavor: r-devel-windows-x86_64

Package ChemoSpecUtils

Current CRAN status: OK: 13

Package exCon

Current CRAN status: OK: 13

Package FuncMap

Current CRAN status: OK: 13

Package HiveR

Current CRAN status: ERROR: 6, OK: 7

Additional issues

M1mac

Version: 0.3.63
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘HiveR.Rmd’ using rmarkdown ! Undefined control sequence. l.447 \pandocbounded {\includegraphics[keepaspectratio]{./images/VSEPR.pdf}} Error: processing vignette 'HiveR.Rmd' failed with diagnostics: LaTeX failed to compile /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/HiveR.Rcheck/vign_test/HiveR/vignettes/HiveR.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See HiveR.log for more info. --- failed re-building ‘HiveR.Rmd’ SUMMARY: processing the following file failed: ‘HiveR.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.3.63
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘HiveR.Rmd’ using rmarkdown ! Undefined control sequence. l.447 \pandocbounded {\includegraphics[keepaspectratio]{./images/VSEPR.pdf}} Error: processing vignette 'HiveR.Rmd' failed with diagnostics: LaTeX failed to compile /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/HiveR.Rcheck/vign_test/HiveR/vignettes/HiveR.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See HiveR.log for more info. --- failed re-building ‘HiveR.Rmd’ SUMMARY: processing the following file failed: ‘HiveR.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.3.63
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘HiveR.Rmd’ using rmarkdown Warning in system2("tlmgr", args, ...) : running command ''tlmgr' search --file --global '/l3backend-pdftex.def'' had status 123 ! Undefined control sequence. l.447 \pandocbounded {\includegraphics[keepaspectratio]{./images/VSEPR.pdf}} Error: processing vignette 'HiveR.Rmd' failed with diagnostics: LaTeX failed to compile /data/gannet/ripley/R/packages/tests-clang/HiveR.Rcheck/vign_test/HiveR/vignettes/HiveR.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See HiveR.log for more info. --- failed re-building ‘HiveR.Rmd’ SUMMARY: processing the following file failed: ‘HiveR.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.3.63
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘HiveR.Rmd’ using rmarkdown Warning in system2("tlmgr", args, ...) : running command ''tlmgr' search --file --global '/l3backend-pdftex.def'' had status 123 ! Undefined control sequence. l.447 \pandocbounded {\includegraphics[keepaspectratio]{./images/VSEPR.pdf}} Error: processing vignette 'HiveR.Rmd' failed with diagnostics: LaTeX failed to compile /data/gannet/ripley/R/packages/tests-devel/HiveR.Rcheck/vign_test/HiveR/vignettes/HiveR.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See HiveR.log for more info. --- failed re-building ‘HiveR.Rmd’ SUMMARY: processing the following file failed: ‘HiveR.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.3.63
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘HiveR.Rmd’ using rmarkdown ! Undefined control sequence. l.447 \pandocbounded {\includegraphics[keepaspectratio]{./images/VSEPR.pdf}} Error: processing vignette 'HiveR.Rmd' failed with diagnostics: LaTeX failed to compile /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/HiveR.Rcheck/vign_test/HiveR/vignettes/HiveR.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See HiveR.log for more info. --- failed re-building ‘HiveR.Rmd’ SUMMARY: processing the following file failed: ‘HiveR.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-patched-linux-x86_64

Version: 0.3.63
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘HiveR.Rmd’ using rmarkdown ! Undefined control sequence. l.447 \pandocbounded {\includegraphics[keepaspectratio]{./images/VSEPR.pdf}} Error: processing vignette 'HiveR.Rmd' failed with diagnostics: LaTeX failed to compile /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/HiveR.Rcheck/vign_test/HiveR/vignettes/HiveR.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See HiveR.log for more info. --- failed re-building ‘HiveR.Rmd’ SUMMARY: processing the following file failed: ‘HiveR.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-release-linux-x86_64

Package LearnPCA

Current CRAN status: OK: 13

Package LindenmayeR

Current CRAN status: OK: 13

Package readJDX

Current CRAN status: OK: 13

Package roxut

Current CRAN status: OK: 13

Package SpecHelpers

Current CRAN status: OK: 13