c35363b6631af33823cc1404e5fd9bbe *DESCRIPTION
c6cb0bad9d9acede91747f56a4f53375 *NAMESPACE
274670ba6a15a4c5f8f2ef10c304e17b *R/DeconRNAseq_CRAN.R
af4cacad8b58f4cd42a0c0876e090a1f *R/PBMC_example.R
0f000962f8da0cd8c52834adab8f3ac9 *R/POA_example.R
56450b3e211de61aefab379bf95a3f23 *R/cellmarker_enrich.R
0bd46b9130f6c36b656a238eff93a0aa *R/coEnrich.R
ba2e8cdafb6aff394abfc11029b2fab6 *R/compare_deconvolution_methods.R
09dcca3a50b04b7e95707610d9932cf4 *R/cwFoldChange_evaluate.R
5cd780903bab61b32360f76123929b11 *R/deconvolute_and_contextualize.R
a286253756d58914a2c7f1a0e526fa80 *R/extract_genes_cell.R
27d7af241d61f54dd57213b6edec95a9 *R/gProfiler_cellWeighted_Foldchange.R
0830197aa380a722bca6bfba9b62efcb *R/generes_to_heatmap.R
59c907e69488df544f713c1a41bc5558 *R/get_gene_symbol.R
5d72c387440ceab8c617669acb4a988e *R/get_signature_matrices.R
5e22cf926a6759473d0ddfcb26108563 *R/gmt.R
47c90bb8f8a7c663529158bc117eb1dc *R/gsva_cellIdentify.R
0db727c585efddc2be7592584787e649 *R/heatmap_generation.R
4b210f709461e16889a6be8094d5d2fd *R/human_mouse_ct_marker_enrich.R
3a21627d4370d47b22dc6bfde5cb2a37 *R/make_TF_barplot.R
6deeafc1eb4752925f4df4a674807a53 *R/pathway_enrich_internal.R
a50f3235d6947159bac6703da1087a88 *R/plotBP.R
e928bfec50aaf9869af06a8b3d7f38b4 *R/process_dgTMatrix_lists.R
4430b8365f6629300be8f87fd8651271 *R/process_from_count.R
da74cd2a2d980e57177e3362793ba2dd *R/scMappR_and_pathway_analysis.R
b7bf477279a1857e53610c44a84909d4 *R/scMappR_tissues.R
3e113b32cd0396f2643b021e7d675e06 *R/seurat_to_generes.R
d0b14ecd7da67daf591167ad2bc5ffa8 *R/single_gene_preferences.R
a2aebe793f30d19a73f8e3ef8a558081 *R/sm.R
8f4808feec4d295e07fd84cce0db1ffc *R/tissue_by_celltype_enirchment.R
cdab035c1d0ce06cc7687d59a8b0a5b8 *R/tissue_scMappR_custom.R
f28e442d6be3ba633b095c81a1db4ea4 *R/tissue_scMappR_internal.R
314e62f34dfcc50216129b819f5cf16f *R/toNum.R
8ce009bbd901e2129e2d38282bcf11d8 *R/tochr.R
161702c49db86617b6435d9682e89d7d *R/topgenes_extract.R
865fbc758d0f330c2cd97f04f5d329e7 *R/two_method_pathway_enrichment.R
8b4f6dd6aad9418be5bc077d1445f07d *README.md
52d9560960b05d671bbd916a88ba18cd *build/vignette.rds
a45cfd9bc6ff5f9b443a64b7e2fd653b *data/PBMC_example.rda
5fb27c204882aa8993bdb36ee64b478a *data/POA_example.rda
6174c08138d1f1b3db8f29b35d59ecf9 *data/gmt.rda
a42473f4ca915b38f43b17181916f252 *data/scMappR_tissues.rda
afa4546eb08fab56f308baf835dfa669 *data/sm.rda
beaccfb22461a95b3e999b61f226cb07 *inst/doc/scMappR_Vignette.R
24b2dbab89e9cea6efacf72333be6183 *inst/doc/scMappR_Vignette.Rmd
1d81386d5db423de612ba8861ed57bdd *inst/doc/scMappR_Vignette.html
7dc528feb18cb108fd3af8ec52e3a9cb *man/DeconRNAseq_CRAN.Rd
7d0657b46a43792c51e9a1f14048e519 *man/PBMC_example.Rd
e82edefe85792c15165573f37acb0e0c *man/POA_example.Rd
bf75486f5ac6d06f7ca5cba7d6335b06 *man/cellmarker_enrich.Rd
c98f3855991f0934ba766fc19ff9af21 *man/coEnrich.Rd
22a6ce5b98ff62d7e1c0641c63c638ac *man/compare_deconvolution_methods.Rd
67fecc1a5b58c14e40ead95d2cf20a5a *man/cwFoldChange_evaluate.Rd
fea7462f4272063dbbf783a497576422 *man/deconvolute_and_contextualize.Rd
b931edd73616ddb871f3c46f9d22ad3e *man/extract_genes_cell.Rd
846c220e31e892b11bba985c3df88734 *man/gProfiler_cellWeighted_Foldchange.Rd
185686c17f89b5507622c4bbbccf3df3 *man/generes_to_heatmap.Rd
6d58d4052ddaad37dbe4f159f271875d *man/get_gene_symbol.Rd
00398c2bf94a63886e16c8d517553d40 *man/get_signature_matrices.Rd
cdac9318b710509aa9fbdf352ab7393d *man/gmt.Rd
bab50d2993cc9b3e6c987daccc28b012 *man/gsva_cellIdentify.Rd
fb26fff3136709a311ff70355dcdaf87 *man/heatmap_generation.Rd
777a4f89ec916c4c78544535c904c5c7 *man/human_mouse_ct_marker_enrich.Rd
96cbc39c4c72457b87d93e44470bd9e0 *man/make_TF_barplot.Rd
95d0ad504f2dd1037c1bff4dd318af45 *man/pathway_enrich_internal.Rd
c66fd5e27802cf63d8703e60f8ebc16e *man/plotBP.Rd
a2e2bde0b9d8e521e93216be4ddd88fe *man/process_dgTMatrix_lists.Rd
f4fed9bed343b7f5be58b903ca3f3d91 *man/process_from_count.Rd
78457c2483d3479d655f6bc36d6c9743 *man/scMappR_and_pathway_analysis.Rd
b0dc874ec370e583684913270bfebd3f *man/scMappR_tissues.Rd
ae9235a3a68e6e164c36700a589b3873 *man/seurat_to_generes.Rd
50fd03d68512923b5795f94b31e6ad66 *man/single_gene_preferences.Rd
141cfa655d545d8204e7356e38b073e4 *man/sm.Rd
45bd99ca3fda708bff2260534ef3eb9c *man/tissue_by_celltype_enrichment.Rd
c847867806d32712fb38734504807a28 *man/tissue_scMappR_custom.Rd
5a82b5b593a1a4ce3d94a7c28a0b8e04 *man/tissue_scMappR_internal.Rd
11408793d867843ed7edda841ad726d5 *man/toNum.Rd
a1c9eca4a5e4b2382c5fcede46ca8e20 *man/tochr.Rd
58a82662de3890a644aa266fad87910b *man/topgenes_extract.Rd
dea0979e1469c968181766345e3b3573 *man/two_method_pathway_enrichment.Rd
e66408ced1fb6a44233eea25bac95fb7 *tests/testthat.R
80cb51bcd2d4b0f39991b26479ec8237 *tests/testthat/test_scMappR_and_pathway_analysis.R
e17844587b96548fac31db4523a63eb8 *tests/testthat/test_tissue_scMappR_custom.R
24b2dbab89e9cea6efacf72333be6183 *vignettes/scMappR_Vignette.Rmd
